Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aquila_20chrysaetos_20canadensis_20[refseq_20GCF_5F000766835.1_20201
4-10-14] 1,142 sequences; 1,192,743,076 total letters
Query= NC_002229.3
Length=177874
Score E
Sequences producing significant alignments: (Bits) Value
seq33 109 6e-19
>seq33
Length=10211343
Score = 109 bits (120), Expect = 6e-19
Identities = 216/311 (69%), Gaps = 34/311 (11%)
Strand=Plus/Plus
Query 139828 CTCCCCTAGCCCGCTGAAAGTCAGCGAGT-AAACAGCGGGCG-----GAGGGAGCGCGGC 139881
||||||| | ||||||||||||||||||| ||||||||| || | |||||||||||
Sbjct 1517329 CTCCCCTCGTCCGCTGAAAGTCAGCGAGTAAAACAGCGGACGGGCGCGGGGGAGCGCGGC 1517388
Query 139882 GACAGTACCATCAATACCTCCGATTAGGGTTAGACACAGCGGAGCCT-TCCACCCGCCAC 139940
||| | ||||||||||| |||| | | |||| |||||||||||
Sbjct 1517389 AGCAG---------------CCATTAGGGTTAGTCACACCAGGGCCTCCCCACCCGCCAC 1517433
Query 139941 GTGTGCCGGGGGAACCCCGCGTGGGGCTCTT--GTAGCTTCCTCCGCCTACGCCCACCGC 139998
| | |||||| |||| || |||||| || ||| ||| ||||| |||||| ||||
Sbjct 1517434 GCGACGCGGGGGCGCCCC-CGCGGGGCTTTTTAAAAGCCTCCGCCGCC-ACGCCCGCCGC 1517491
Query 139999 GCGCCTATTGGCC----GGGCTGTACGCTGCCGCGTAGCTATTGGCGGCGGGGAGGAGAG 140054
|| | ||||| | |||| | || | || | |||||| |||| | ||||||
Sbjct 1517492 GCCTCCATTGGTCGGAAGGGCACCCCCCTCCTCCGCCACCATTGGCTGCGGCGGGGAGAG 1517551
Query 140055 CGAGCAGAGAGGG-GCCGGT-GCGGGAGTTTGGAACTCCGCGGTCATTCAT-CTCCCGCC 140111
| | || ||||| | || ||||||||||||||| | || ||||| | | ||||||
Sbjct 1517552 -GGGGAGGGAGGGAGAGAGTGGCGGGAGTTTGGAACGCTCGGGCCATTCGTCCCCCCGCC 1517610
Query 140112 ACGCCCCATGC 140122
| || | |||
Sbjct 1517611 GCACCACGTGC 1517621
Score = 109 bits (120), Expect = 6e-19
Identities = 216/311 (69%), Gaps = 34/311 (11%)
Strand=Plus/Minus
Query 1498 GCATGGGGCGTGGCGGGAG-ATGAATGACCGCGGAGTTCCAAACTCCCGC-ACCGGC-CC 1554
||| | || | |||||| | | ||||| || | ||||||||||||||| || | ||
Sbjct 1517621 GCACGTGGTGCGGCGGGGGGACGAATGGCCCGAGCGTTCCAAACTCCCGCCACTCTCTCC 1517562
Query 1555 CTCTCTGCTCGCTCTCCTCCCCGCCGCCAATAGCTACGCGGCAGCGTACAGCCC----GG 1610
||| || | | |||||| | |||| |||||| | || | || | |||| |
Sbjct 1517561 CTCCCTCCCC-CTCTCCCCGCCGCAGCCAATGGTGGCGGAGGAGGGGGGTGCCCTTCCGA 1517503
Query 1611 CCAATAGGCGCGCGGTGGGCGTAGGCGGAGGAAGCTAC--AAGAGCCCCACGCGGGGTTC 1668
||||| | |||||| |||||| ||||| ||| ||| || |||||| || |||| |
Sbjct 1517502 CCAATGGAGGCGCGGCGGGCGT-GGCGGCGGAGGCTTTTAAAAAGCCCCGCG-GGGGCGC 1517445
Query 1669 CCCCGGCACACGTGGCGGGTGGA-AGGCTCCGCTGTGTCTAACCCTAATCGGAGGTATTG 1727
||||| | |||||||||||| |||| | | |||| ||||||||||| |
Sbjct 1517444 CCCCGCGTCGCGTGGCGGGTGGGGAGGCCCTGGTGTGACTAACCCTAATGG--------- 1517394
Query 1728 ATGGTACTGTCGCCGCGCTCCCTC-----CGCCCGCTGTTT-ACTCGCTGACTTTCAGCG 1781
||| ||||||||||| | || ||||||||| ||||||||||||||||||
Sbjct 1517393 ------CTGCTGCCGCGCTCCCCCGCGCCCGTCCGCTGTTTTACTCGCTGACTTTCAGCG 1517340
Query 1782 GGCTAGGGGAG 1792
| | |||||||
Sbjct 1517339 GACGAGGGGAG 1517329
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 569060676542880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |