Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aquila_20chrysaetos_20canadensis_20[refseq_20GCF_5F000766835.1_20201
4-10-14] 1,142 sequences; 1,192,743,076 total letters
Query= NC_002665.1
Length=108873
Score E
Sequences producing significant alignments: (Bits) Value
seq4 372 2e-98
seq23 86.0 4e-12
seq34 82.4 5e-11
>seq4
Length=24539817
Score = 372 bits (412), Expect = 2e-98
Identities = 753/1107 (68%), Gaps = 14/1107 (1%)
Strand=Plus/Minus
Query 107523 ATCAACTGTTCTGGGATCACGCGAGGGGACCAGGAAGCAGTGGTCCAGGCCCTCCTAGAC 107582
|||||||| || |||||| || || || || |||| | |||||| || |
Sbjct 5980324 ATCAACTGCTCGGGGATCGTCCGCGGCGATGAGCAAGCCATCCGGGAGGCCCAGCTCAGC 5980265
Query 107583 AACCTGGAAGTGAAGAAAAAGCGGTCGCCTCTCACTGGCACCTATTACCTCAACATAACC 107642
|||||||| || ||| | || | |||| || | | | ||||| ||||| ||
Sbjct 5980264 AACCTGGAGGTTGCGAACAGAAGGGCTTCTCTGACGCCCGGCGAGTACCTGAACATGACG 5980205
Query 107643 AGAGACTGTGAGCG-CTTCAAGG---CCCAAAGGAAGTTCATACAGTTCCCACTGAGTAA 107698
| ||||| ||| |||||||| ||| || ||||| ||||||| ||||| |
Sbjct 5980204 AAGGACTGC-AGCAACTTCAAGGAGACCC---GGCGATTCATCGAGTTCCCGCTGAGCCA 5980149
Query 107699 AGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAGATTGAAAACTT 107758
|| ||| || |||||||| |||||||| ||||| |||| | || || || | ||
Sbjct 5980148 GGAGGAGGCGGAGTTCCCCATCGCCTACTCCATGGTCATCCACAACAAAATCGAGATGTT 5980089
Query 107759 TGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTCCACGTGGATGT 107818
||| ||||| ||||| || | || ||||| |||||| | ||||| |||||||| ||
Sbjct 5980088 TGAGCGGCTCCTGCGCTCCCTCTACGCCCCCCAGAACGTCTACTGCGTCCACGTCGACAG 5980029
Query 107819 GAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGCTTCCCCAATGT 107878
||||| || | | ||| | ||||| || |||||| | ||||||||||||| ||
Sbjct 5980028 CAAGTCTCCGGCCGCCTTCCAGGAGGCCGTGCGGGCCATCGTGGCCTGCTTCCCCAACGT 5979969
Query 107879 CTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGAGTGCAAGCTGA 107938
||| |||| || |||| |||||| || |||||||||||| | |||| |||||
Sbjct 5979968 CTTTGTGGCGAGCCGCTTGGAAGAGGTGGTGTACGCCTCCTGGTCCCGGCTGCAGGCTGA 5979909
Query 107939 CCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAGTGCCATGGAAGTACTTACTGAATAC 107998
||| ||||| ||| | ||| |||| |||||| | |||| ||| ||| | || || ||
Sbjct 5979908 CCTCAACTGCATGCAGGACCTGCTGCAGAGCCCCATGCCGTGGCGCTACGTCCTCAACAC 5979849
Query 107999 ATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGGCCCTCAAGATGTT 108058
||||| || || |||||||| |||||||| | |||||| |||| ||||| ||| || |
Sbjct 5979848 CTGCGGCACCGATTTCCCCATCAAGACCAACGTCGAGATCGTCCGTGCCCTGAAGGTGCT 5979789
Query 108059 GAAGGGTAAGAACAGTATGGAGTCTGAGGTACCTTCTGAGTCCaaaaaaaaTCGCTGGAA 108118
| |||| |||||| |||||||| ||| | || | |||| |||||| |
Sbjct 5979788 GCAGGGGCGGAACAGCATGGAGTCAGAGAAGGCCTCGGGCCCCAAGCGGGCGCGCTGGCA 5979729
Query 108119 ATACCGCTATGAGGTGACAGACACACTGTACCCTACCAGCAAGA-TGAAGGACCCTCCCC 108177
|||| | | | ||| | | | || | |||| | | ||| || || |
Sbjct 5979728 GTACCACCACCAAGTGGGGAAGTTCATCTTCCGGA-CAGCCACAGAGAAACCTCCGCCAC 5979670
Query 108178 CTGATAATTTACCCATGTTCACAGGGAATGCCTATTTTGTGGCCTCTCGAGCCTTTGTCC 108237
| | || | ||||||||||| || || || || |||||| | | || ||||| || |
Sbjct 5979669 CCCACAACTATCCCATGTTCACGGGCAACGCGTACATTGTGGTCACGCGGGCCTTCGTGC 5979610
Query 108238 AACATGTCTTAGACAACCCTAAATCCCAAAGACTGGTTGAATGGGTCAAAGACACCTATA 108297
| | |||| || ||||| | | || | | || |||| ||| |||||||| |
Sbjct 5979609 AGTACATCTTTGAGAACCCCACGGCGCAGCAGTTCCTCGAGTGGGCCAAGGACACCTACA 5979550
Query 108298 GCCCCGACGAACACCTCTGGGCCACCCT--TCAGCGTGCTCCGTGGATGCCTGGCTCTGT 108355
|||| ||||||||| ||||||||||||| | || ||| ||| | |||| ||| |
Sbjct 5979549 GCCCTGACGAACACGTCTGGGCCACCCTCAACCGCATGC-CCG-GCGTGCCGGGCGCCAC 5979492
Query 108356 TCCTAGCCACCCCAAGTATCACATCTCAGACATGACTGCCATCGCCAGGCTCGTCAAGTG 108415
|| | ||||| || |||| ||||||| ||| | || | || ||||||||
Sbjct 5979491 GCCCCAGAATGACAAGTTCCAGCTCTCGGACATGAACGCCCTGCCCCGCCTGGTCAAGTG 5979432
Query 108416 GCAGTACCACGAGGGAGATGTCAGCATGGGGGCGCCTTATGCACCCTGCTCTGGAATCCA 108475
|||||||| ||||| || ||||| ||| ||||| || | |||||| | || ||
Sbjct 5979431 GCAGTACCTGGAGGGCGACACCAGCAAGGGCGCGCCCTACCCGCCCTGCACCGGCCAGCA 5979372
Query 108476 TCGGAGGGCCATCTGCATTTACGGGGCCGGGGACCTGTACTGGATTCTCCAGAACCATCA 108535
| | | || |||| || |||||||| || ||| || |||| | |||||| | || ||
Sbjct 5979371 CCAGCGCTCCGTCTGTATCTACGGGGCGGGCGACGTGCCCTGGTTGCTCCAGCAGCACCA 5979312
Query 108536 CCTCTTGGCAAACAAGTTTGACCCGAGGGTGGATGATAACGTCCTGCAGTGCTTAGAAGA 108595
||||||||| |||||||| ||||| ||||| | || | | |||||| | || ||
Sbjct 5979311 CCTCTTGGCCAACAAGTTCGACCCCCTCGTGGACAACGCCGCCATCCAGTGCCTCGAGGA 5979252
Query 108596 GTACCTACGTCATAAGGCCATCTATGG 108622
| |||| || || | |||| |||| ||
Sbjct 5979251 GCACCTGCGCCACAGGGCCCTCTACGG 5979225
>seq23
Length=12524172
Score = 86.0 bits (94), Expect = 4e-12
Identities = 227/343 (66%), Gaps = 4/343 (1%)
Strand=Plus/Plus
Query 107688 CCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAG 107747
|| || || || ||||| ||| || || ||||| ||||| || ||||| || | ||
Sbjct 3181703 CCTCTCAGCAATGAAGAAGCAGAATTTCCAATTGCTTACTCAATAGTGGTTTATCACAAA 3181762
Query 107748 ATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTC 107807
||||| | |||| | || || || | | |||||||||||||| | |||||| |
Sbjct 3181763 ATTGAGATGCTTGATAGACTTCTAAGATCAATCTATGCCCCTCAGAATTTTTACTGTATT 3181822
Query 107808 CACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGC 107867
|| || || ||||| ||||| |||| | || || |||| || | || ||
Sbjct 3181823 CATGTTGACAAAAAGTCTCCAGAATCTTTTTTTGCTGCTGTGAAGGGAATAGTCTCATGT 3181882
Query 107868 TTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGA 107927
|| |||||||| || |||| |||| | || || ||||| || ||| |||
Sbjct 3181883 TTTGATAATGTCTTTATTTCCAGCCAGTTAGAGAGTGTTGTATATGCTTCATGGAGCAGG 3181942
Query 107928 GTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAGTGCCA--TGGAAGT 107985
||||| || ||| | ||||| ||| |||| | || |||| ||| | | ||||| |
Sbjct 3181943 GTGCAGGCAGACATTAACTGCATGAAAGA-TCTCTACAGA-AGAAGTTCAAACTGGAAAT 3182000
Query 107986 ACTTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAA 108028
|| || | || || || ||||| || |||||||||||
Sbjct 3182001 ACCTAATAAACCTCTGTGGCCTGGACTTTCCTATAAAGACCAA 3182043
>seq34
Length=10022417
Score = 82.4 bits (90), Expect = 5e-11
Identities = 222/336 (66%), Gaps = 8/336 (2%)
Strand=Plus/Minus
Query 107711 CTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAGATTGAAAACTTTGAACGGCTGCT 107770
||||||||| |||||| ||| | || || || | || | ||| || ||||| |
Sbjct 5254257 CTTCCCCATCGCCTACGTCATGACCCTGCACAAGGAGTTCGAGACCTTCGAGCGGCTCTT 5254198
Query 107771 GCGAGCCGTGTA--TGCCCCTCAGAACATATACTGTGTCCACGTGGATGTGAAGTCCCCA 107828
|| || ||||| |||||| | ||| | ||||| ||||||||||| | ||| | ||
Sbjct 5254197 CCGGGCGGTGTACATGCCCC--AAAACGTCTACTGCGTCCACGTGGACGCCAAGGCGCCG 5254140
Query 107829 GAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGCTTCCCCAATGTCTTCATGGCC 107888
| | ||| | |||||||| | | | | |||||||||||||| |||| | |||
Sbjct 5254139 GCCCCCTTCCAGCAGGCGGTCCGGCGCCTGGTGGGCTGCTTCCCCAATGCCTTCCTCGCC 5254080
Query 107889 AGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGAGTGCAAGCTGACCTGAACTGT 107948
| || | |||||| || | | | |||| | ||| || ||||| |||
Sbjct 5254079 TCCCGGGCGGAGCGGGTGGTCTACGGCGGCGCGTCCCGCCTGCGGGCCGACCTCCGCTGC 5254020
Query 107949 ATGGAAGACTTGCT--CCAGAGCTCAGTGCCATGGAAGTACTTACTGAATACATGCGGGA 108006
|||| |||| |||| || | | ||||| ||| ||| | || || || |||||
Sbjct 5254019 ATGGGAGACCTGCTGGCCTCGG--CCGTGCCCTGGCGCTACCTGCTCAACACCTGCGGCC 5253962
Query 108007 CAGACTTCCCCATAAAGACCAATGCCGAGATGGTCC 108042
||||||||| | |||||||| ||||| ||||
Sbjct 5253961 AGGACTTCCCCTTGAAGACCAACCGGGAGATCGTCC 5253926
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 348263952751308
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |