Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aquila_20chrysaetos_20canadensis_20[refseq_20GCF_5F000766835.1_20201 4-10-14] 1,142 sequences; 1,192,743,076 total letters Query= NC_002665.1 Length=108873 Score E Sequences producing significant alignments: (Bits) Value seq4 372 2e-98 seq23 86.0 4e-12 seq34 82.4 5e-11 >seq4 Length=24539817 Score = 372 bits (412), Expect = 2e-98 Identities = 753/1107 (68%), Gaps = 14/1107 (1%) Strand=Plus/Minus Query 107523 ATCAACTGTTCTGGGATCACGCGAGGGGACCAGGAAGCAGTGGTCCAGGCCCTCCTAGAC 107582 |||||||| || |||||| || || || || |||| | |||||| || | Sbjct 5980324 ATCAACTGCTCGGGGATCGTCCGCGGCGATGAGCAAGCCATCCGGGAGGCCCAGCTCAGC 5980265 Query 107583 AACCTGGAAGTGAAGAAAAAGCGGTCGCCTCTCACTGGCACCTATTACCTCAACATAACC 107642 |||||||| || ||| | || | |||| || | | | ||||| ||||| || Sbjct 5980264 AACCTGGAGGTTGCGAACAGAAGGGCTTCTCTGACGCCCGGCGAGTACCTGAACATGACG 5980205 Query 107643 AGAGACTGTGAGCG-CTTCAAGG---CCCAAAGGAAGTTCATACAGTTCCCACTGAGTAA 107698 | ||||| ||| |||||||| ||| || ||||| ||||||| ||||| | Sbjct 5980204 AAGGACTGC-AGCAACTTCAAGGAGACCC---GGCGATTCATCGAGTTCCCGCTGAGCCA 5980149 Query 107699 AGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAGATTGAAAACTT 107758 || ||| || |||||||| |||||||| ||||| |||| | || || || | || Sbjct 5980148 GGAGGAGGCGGAGTTCCCCATCGCCTACTCCATGGTCATCCACAACAAAATCGAGATGTT 5980089 Query 107759 TGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTCCACGTGGATGT 107818 ||| ||||| ||||| || | || ||||| |||||| | ||||| |||||||| || Sbjct 5980088 TGAGCGGCTCCTGCGCTCCCTCTACGCCCCCCAGAACGTCTACTGCGTCCACGTCGACAG 5980029 Query 107819 GAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGCTTCCCCAATGT 107878 ||||| || | | ||| | ||||| || |||||| | ||||||||||||| || Sbjct 5980028 CAAGTCTCCGGCCGCCTTCCAGGAGGCCGTGCGGGCCATCGTGGCCTGCTTCCCCAACGT 5979969 Query 107879 CTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGAGTGCAAGCTGA 107938 ||| |||| || |||| |||||| || |||||||||||| | |||| ||||| Sbjct 5979968 CTTTGTGGCGAGCCGCTTGGAAGAGGTGGTGTACGCCTCCTGGTCCCGGCTGCAGGCTGA 5979909 Query 107939 CCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAGTGCCATGGAAGTACTTACTGAATAC 107998 ||| ||||| ||| | ||| |||| |||||| | |||| ||| ||| | || || || Sbjct 5979908 CCTCAACTGCATGCAGGACCTGCTGCAGAGCCCCATGCCGTGGCGCTACGTCCTCAACAC 5979849 Query 107999 ATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGGCCCTCAAGATGTT 108058 ||||| || || |||||||| |||||||| | |||||| |||| ||||| ||| || | Sbjct 5979848 CTGCGGCACCGATTTCCCCATCAAGACCAACGTCGAGATCGTCCGTGCCCTGAAGGTGCT 5979789 Query 108059 GAAGGGTAAGAACAGTATGGAGTCTGAGGTACCTTCTGAGTCCaaaaaaaaTCGCTGGAA 108118 | |||| |||||| |||||||| ||| | || | |||| |||||| | Sbjct 5979788 GCAGGGGCGGAACAGCATGGAGTCAGAGAAGGCCTCGGGCCCCAAGCGGGCGCGCTGGCA 5979729 Query 108119 ATACCGCTATGAGGTGACAGACACACTGTACCCTACCAGCAAGA-TGAAGGACCCTCCCC 108177 |||| | | | ||| | | | || | |||| | | ||| || || | Sbjct 5979728 GTACCACCACCAAGTGGGGAAGTTCATCTTCCGGA-CAGCCACAGAGAAACCTCCGCCAC 5979670 Query 108178 CTGATAATTTACCCATGTTCACAGGGAATGCCTATTTTGTGGCCTCTCGAGCCTTTGTCC 108237 | | || | ||||||||||| || || || || |||||| | | || ||||| || | Sbjct 5979669 CCCACAACTATCCCATGTTCACGGGCAACGCGTACATTGTGGTCACGCGGGCCTTCGTGC 5979610 Query 108238 AACATGTCTTAGACAACCCTAAATCCCAAAGACTGGTTGAATGGGTCAAAGACACCTATA 108297 | | |||| || ||||| | | || | | || |||| ||| |||||||| | Sbjct 5979609 AGTACATCTTTGAGAACCCCACGGCGCAGCAGTTCCTCGAGTGGGCCAAGGACACCTACA 5979550 Query 108298 GCCCCGACGAACACCTCTGGGCCACCCT--TCAGCGTGCTCCGTGGATGCCTGGCTCTGT 108355 |||| ||||||||| ||||||||||||| | || ||| ||| | |||| ||| | Sbjct 5979549 GCCCTGACGAACACGTCTGGGCCACCCTCAACCGCATGC-CCG-GCGTGCCGGGCGCCAC 5979492 Query 108356 TCCTAGCCACCCCAAGTATCACATCTCAGACATGACTGCCATCGCCAGGCTCGTCAAGTG 108415 || | ||||| || |||| ||||||| ||| | || | || |||||||| Sbjct 5979491 GCCCCAGAATGACAAGTTCCAGCTCTCGGACATGAACGCCCTGCCCCGCCTGGTCAAGTG 5979432 Query 108416 GCAGTACCACGAGGGAGATGTCAGCATGGGGGCGCCTTATGCACCCTGCTCTGGAATCCA 108475 |||||||| ||||| || ||||| ||| ||||| || | |||||| | || || Sbjct 5979431 GCAGTACCTGGAGGGCGACACCAGCAAGGGCGCGCCCTACCCGCCCTGCACCGGCCAGCA 5979372 Query 108476 TCGGAGGGCCATCTGCATTTACGGGGCCGGGGACCTGTACTGGATTCTCCAGAACCATCA 108535 | | | || |||| || |||||||| || ||| || |||| | |||||| | || || Sbjct 5979371 CCAGCGCTCCGTCTGTATCTACGGGGCGGGCGACGTGCCCTGGTTGCTCCAGCAGCACCA 5979312 Query 108536 CCTCTTGGCAAACAAGTTTGACCCGAGGGTGGATGATAACGTCCTGCAGTGCTTAGAAGA 108595 ||||||||| |||||||| ||||| ||||| | || | | |||||| | || || Sbjct 5979311 CCTCTTGGCCAACAAGTTCGACCCCCTCGTGGACAACGCCGCCATCCAGTGCCTCGAGGA 5979252 Query 108596 GTACCTACGTCATAAGGCCATCTATGG 108622 | |||| || || | |||| |||| || Sbjct 5979251 GCACCTGCGCCACAGGGCCCTCTACGG 5979225 >seq23 Length=12524172 Score = 86.0 bits (94), Expect = 4e-12 Identities = 227/343 (66%), Gaps = 4/343 (1%) Strand=Plus/Plus Query 107688 CCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAG 107747 || || || || ||||| ||| || || ||||| ||||| || ||||| || | || Sbjct 3181703 CCTCTCAGCAATGAAGAAGCAGAATTTCCAATTGCTTACTCAATAGTGGTTTATCACAAA 3181762 Query 107748 ATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTC 107807 ||||| | |||| | || || || | | |||||||||||||| | |||||| | Sbjct 3181763 ATTGAGATGCTTGATAGACTTCTAAGATCAATCTATGCCCCTCAGAATTTTTACTGTATT 3181822 Query 107808 CACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGC 107867 || || || ||||| ||||| |||| | || || |||| || | || || Sbjct 3181823 CATGTTGACAAAAAGTCTCCAGAATCTTTTTTTGCTGCTGTGAAGGGAATAGTCTCATGT 3181882 Query 107868 TTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGA 107927 || |||||||| || |||| |||| | || || ||||| || ||| ||| Sbjct 3181883 TTTGATAATGTCTTTATTTCCAGCCAGTTAGAGAGTGTTGTATATGCTTCATGGAGCAGG 3181942 Query 107928 GTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAGTGCCA--TGGAAGT 107985 ||||| || ||| | ||||| ||| |||| | || |||| ||| | | ||||| | Sbjct 3181943 GTGCAGGCAGACATTAACTGCATGAAAGA-TCTCTACAGA-AGAAGTTCAAACTGGAAAT 3182000 Query 107986 ACTTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAA 108028 || || | || || || ||||| || ||||||||||| Sbjct 3182001 ACCTAATAAACCTCTGTGGCCTGGACTTTCCTATAAAGACCAA 3182043 >seq34 Length=10022417 Score = 82.4 bits (90), Expect = 5e-11 Identities = 222/336 (66%), Gaps = 8/336 (2%) Strand=Plus/Minus Query 107711 CTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAGATTGAAAACTTTGAACGGCTGCT 107770 ||||||||| |||||| ||| | || || || | || | ||| || ||||| | Sbjct 5254257 CTTCCCCATCGCCTACGTCATGACCCTGCACAAGGAGTTCGAGACCTTCGAGCGGCTCTT 5254198 Query 107771 GCGAGCCGTGTA--TGCCCCTCAGAACATATACTGTGTCCACGTGGATGTGAAGTCCCCA 107828 || || ||||| |||||| | ||| | ||||| ||||||||||| | ||| | || Sbjct 5254197 CCGGGCGGTGTACATGCCCC--AAAACGTCTACTGCGTCCACGTGGACGCCAAGGCGCCG 5254140 Query 107829 GAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGCTTCCCCAATGTCTTCATGGCC 107888 | | ||| | |||||||| | | | | |||||||||||||| |||| | ||| Sbjct 5254139 GCCCCCTTCCAGCAGGCGGTCCGGCGCCTGGTGGGCTGCTTCCCCAATGCCTTCCTCGCC 5254080 Query 107889 AGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGAGTGCAAGCTGACCTGAACTGT 107948 | || | |||||| || | | | |||| | ||| || ||||| ||| Sbjct 5254079 TCCCGGGCGGAGCGGGTGGTCTACGGCGGCGCGTCCCGCCTGCGGGCCGACCTCCGCTGC 5254020 Query 107949 ATGGAAGACTTGCT--CCAGAGCTCAGTGCCATGGAAGTACTTACTGAATACATGCGGGA 108006 |||| |||| |||| || | | ||||| ||| ||| | || || || ||||| Sbjct 5254019 ATGGGAGACCTGCTGGCCTCGG--CCGTGCCCTGGCGCTACCTGCTCAACACCTGCGGCC 5253962 Query 108007 CAGACTTCCCCATAAAGACCAATGCCGAGATGGTCC 108042 ||||||||| | |||||||| ||||| |||| Sbjct 5253961 AGGACTTCCCCTTGAAGACCAACCGGGAGATCGTCC 5253926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 348263952751308