Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aquila_20chrysaetos_20canadensis_20[refseq_20GCF_5F000766835.1_20201
4-10-14] 1,142 sequences; 1,192,743,076 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq20 129 5e-25
seq6 102 8e-17
>seq20
Length=13035929
Score = 129 bits (142), Expect = 5e-25
Identities = 109/134 (81%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 11654 TCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGttttttt 11713
|| |||||||| || |||||||||||||| || | ||| ||||| ||||| | ||| ||
Sbjct 5722764 TCATCTCTACTGATGAGTTCATTAGAAAAAGTGAGTCCAGGCATTAATCCCCTTTTCTTC 5722823
Query 11714 ATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCT 11773
| |||||| || | ||||| || ||||||||||| ||||| ||||| |||||||| |||
Sbjct 5722824 AGCCAAAAAATTGATGCAAAAGAGCCAGAAAAGAAGATTCCTTCCACTGCTGCAAAAGCT 5722883
Query 11774 ACTACTCTTTCTCC 11787
||||| | ||||||
Sbjct 5722884 ACTACACGTTCTCC 5722897
>seq6
Length=21260008
Score = 102 bits (112), Expect = 8e-17
Identities = 103/134 (77%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 11654 TCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGttttttt 11713
|| ||||| || || |||||||| || || || | ||| ||||||| || | || ||
Sbjct 17300070 TCATCTCTGCTAATAAGTTCATTGGAGAAAGTCAGTCCAGGCATCAGGCCCCTCTTCTTC 17300011
Query 11714 ATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCT 11773
| |||||||||||||||||| ||||| |||||||| || || || || || ||||| ||
Sbjct 17300010 AGCCAAAATATAGCAGCAAAGGAACCCGAAAAGAAGATGCCTTCAACTGCAGCAAAAGCA 17299951
Query 11774 ACTACTCTTTCTCC 11787
|| ||||| || ||
Sbjct 17299950 ACCACTCTCTCACC 17299937
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468518111808480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |