Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aquila_20chrysaetos_20canadensis_20[refseq_20GCF_5F000766835.1_20201 4-10-14] 1,142 sequences; 1,192,743,076 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq49 87.8 2e-12 >seq49 Length=8140862 Score = 87.8 bits (96), Expect = 2e-12 Identities = 96/125 (77%), Gaps = 2/125 (2%) Strand=Plus/Minus Query 153684 ACTATTTCCGCACACAAATTGCTGCATTTTATCAGGCCGCAATTACT-TTGATTGCTTTT 153742 |||||||| | ||||| |||||||||||| || | || || | || |||||||| || Sbjct 7588633 ACTATTTCTGTACACAGATTGCTGCATTTGAT-GGTCCCTAAGTTCTGCTGATTGCTCTT 7588575 Query 153743 GCGGTTACAAGCGTCCTTGTATAGCATGTATGGTGTGCCGGTTTCGGCTTGAATTTCTAT 153802 ||||| |||| ||| ||||| |||||||| |||||||| || || | ||| ||| || Sbjct 7588574 CCGGTTGCAAGAGTCTTTGTACAGCATGTACGGTGTGCCAGTCTCTGTCTGAGATTCAAT 7588515 Query 153803 AATAG 153807 |||| Sbjct 7588514 GATAG 7588510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496056918686400