Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aquila_20chrysaetos_20canadensis_20[refseq_20GCF_5F000766835.1_20201
4-10-14] 1,142 sequences; 1,192,743,076 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq6 129 8e-25
seq20 120 4e-22
seq49 95.1 2e-14
>seq6
Length=21260008
Score = 129 bits (142), Expect = 8e-25
Identities = 110/136 (81%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 49982 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 50041
|||| ||||| ||||| ||||| ||||| || || ||||| ||||| ||||| | ||| |
Sbjct 17300072 CCTCATCTCTGCTAATAAGTTCATTGGAGAAAGTCAGTCCAGGCATCAGGCCCCTCTTCT 17300013
Query 50042 TAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGG 50101
| ||||||||||| | ||||| || || ||||||||||| ||||| ||||| ||||| |
Sbjct 17300012 TCAGCCAAAATATAGCAGCAAAGGAACCCGAAAAGAAGATGCCTTCAACTGCAGCAAAAG 17299953
Query 50102 CAACAAGTCTCTCTCC 50117
|||| | |||||| ||
Sbjct 17299952 CAACCACTCTCTCACC 17299937
>seq20
Length=13035929
Score = 120 bits (132), Expect = 4e-22
Identities = 101/124 (81%), Gaps = 0/124 (0%)
Strand=Plus/Plus
Query 49982 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 50041
|||| |||||||| || ||||| || ||||| |||||||| ||||||| || | || |
Sbjct 5722762 CCTCATCTCTACTGATGAGTTCATTAGAAAAAGTGAGTCCAGGCATTAATCCCCTTTTCT 5722821
Query 50042 TAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGG 50101
| |||||||| || || ||||| || |||||||||||||||||||| ||||| ||||| |
Sbjct 5722822 TCAGCCAAAAAATTGATGCAAAAGAGCCAGAAAAGAAGATTCCTTCCACTGCTGCAAAAG 5722881
Query 50102 CAAC 50105
| ||
Sbjct 5722882 CTAC 5722885
>seq49
Length=8140862
Score = 95.1 bits (104), Expect = 2e-14
Identities = 112/149 (75%), Gaps = 2/149 (1%)
Strand=Plus/Minus
Query 79939 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 79998
||||| ||||| ||||||||||||||||| || || | || || ||||||| || |||
Sbjct 7587298 ACTCGCTTCATGAAGAGATCAGGAATCCAGAGGGCAAAGAAAAGGTCTCTGGCTCGCTGC 7587239
Query 79999 TCCTCGTTTCCTGTATTCTT-TTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGG 80057
|| || || || || ||||| |||||| || || ||| | | || || ||||||| ||
Sbjct 7587238 TCTTCTTTCCCAGTGTTCTTCTTTAAG-TCAAGAAACTCAAAGATGTCCAAATGCCATGG 7587180
Query 80058 TTCCAAGTATATGGCCATAACTCCCGGTC 80086
|||| ||| ||||| | | | || ||||
Sbjct 7587179 CTCCAGGTAGATGGCAAAAGCCCCAGGTC 7587151
Score = 91.5 bits (100), Expect = 2e-13
Identities = 85/108 (79%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 79059 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCAC 79118
||| ||||| ||||| || | ||||| || ||||| || |||||||| || || || |
Sbjct 7592534 TACCTGAAACTCTCCTGAGAGGACTCTGCGTGTGTAGATGTTACTGGTGTAGGGCTCAAT 7592475
Query 79119 CGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGG 79166
||||||||||| ||||| || |||||||| || || |||||||| ||
Sbjct 7592474 GGATTCATTATTGCCCAAGATCTGAGCAGTAGAAGCAGTTGGCATGGG 7592427
Score = 86.0 bits (94), Expect = 9e-12
Identities = 121/170 (71%), Gaps = 0/170 (0%)
Strand=Plus/Minus
Query 79300 TATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAA 79359
||||||||||| ||||||| || | ||| | |||||| || || || || || || |||
Sbjct 7591025 TATGTTTCATATGGTCCTTGCTCCTTGGCAAGTTCACAGCTGGCTTCCAAAGCACCATAA 7590966
Query 79360 TAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAA 79419
||||||||||| ||||| | || || | || || || | || |||||||| ||
Sbjct 7590965 TAAATGGTTTCAAAAATGTGCTGGTTCAAGCGCTGGGCCTCAGGACTTTCAAATGGGTAC 7590906
Query 79420 TTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGG 79469
| | | ||||| || ||||| | || || |||||||| || || ||
Sbjct 7590905 CTCATCAAGATAAAAGCATCTGCCAGGCCCTGCACACCAATGCCAATGGG 7590856
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718258546712880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |