Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aquila_20chrysaetos_20canadensis_20[refseq_20GCF_5F000766835.1_20201 4-10-14] 1,142 sequences; 1,192,743,076 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq49 93.3 4e-14 >seq49 Length=8140862 Score = 93.3 bits (102), Expect = 4e-14 Identities = 96/123 (78%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 157106 ACTATTTCCGCACACAAATTGCTGCATTTTATCAATCCGCAATTACTT-TGATTGCTTTT 157164 |||||||| | ||||| |||||||||||| || ||| || | || |||||||| || Sbjct 7588633 ACTATTTCTGTACACAGATTGCTGCATTTGATGG-TCCCTAAGTTCTGCTGATTGCTCTT 7588575 Query 157165 GCGGTTGCAAGCGTCCTTGTATAACATGTACGGTGTGCCGGTTTCGGCTTGAATTTCTAT 157224 |||||||||| ||| ||||| | ||||||||||||||| || || | ||| ||| || Sbjct 7588574 CCGGTTGCAAGAGTCTTTGTACAGCATGTACGGTGTGCCAGTCTCTGTCTGAGATTCAAT 7588515 Query 157225 GAT 157227 ||| Sbjct 7588514 GAT 7588512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507007162369440