Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aquila_20chrysaetos_20canadensis_20[refseq_20GCF_5F000766835.1_20201 4-10-14] 1,142 sequences; 1,192,743,076 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq39 96.9 2e-15 >seq39 Length=9497852 Score = 96.9 bits (106), Expect = 2e-15 Identities = 135/184 (73%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 25773 CATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTC 25832 ||| || |||| |||||||| || | |||||||||||| || || || ||||| | || Sbjct 343638 CATATCTTTGTATTCTGCTCCAAAGTGCCTCCACTGGAAACCATAAACTGGTCCCAAATC 343697 Query 25833 TCCATCTTCCCT-GTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGT 25891 || || || || ||||| ||| ||| |||||||| || || | || ||||| || | Sbjct 343698 CCCCTCCTCTCTGGTGCTGAAA-CCCTGCTTATCCAGGAACTCACGTGATCCATTAGCAT 343756 Query 25892 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACC 25951 |||| ||||| || || || | ||||||||||| | || || || || || || || | Sbjct 343757 CCCAAATCTTCACACCTTTTGCAGAGAGCTCTTTAGCATTCGTAGAACC-CT-ACAAAAC 343814 Query 25952 ACAG 25955 |||| Sbjct 343815 ACAG 343818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340132865922366