Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aquila_20chrysaetos_20canadensis_20[refseq_20GCF_5F000766835.1_20201
4-10-14] 1,142 sequences; 1,192,743,076 total letters
Query= NC_006150.1
Length=221454
Score E
Sequences producing significant alignments: (Bits) Value
seq69 147 3e-30
seq28 109 8e-19
>seq69
Length=6109482
Score = 147 bits (162), Expect = 3e-30
Identities = 223/316 (71%), Gaps = 1/316 (0%)
Strand=Plus/Plus
Query 8679 GGAACGCGGCCAACGGACACCCTTTGACGTTGCTACAGACTAGAGACTGGATAGTTGCAC 8738
|||| || | || ||||| ||||| || ||| | |||| || ||| | | |||
Sbjct 4098585 GGAAAGCAGTGAAAGGACAGCCTTTCACATTGTTGCAGATAAGCTTCTGTAAGGAGGCAG 4098644
Query 8739 TCTTGACGATCCCAAACCCCACGTCTCCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGG 8798
| |||| || |||| ||||| | ||| || |||||||| || |||||||| | ||||
Sbjct 4098645 TATTGATTATTTCAAAGCCCACTTTTCCACCAAAGGTGCTAGGCTTCCAGTACTCAGGGG 4098704
Query 8799 AGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGC 8858
||||||| | || |||| || ||||| || || ||||| || || | ||| | ||
Sbjct 4098705 AGCAGATAGCATTTCCCATCAGTCCTTTCAGAGAGAACGGTGCTCCAATCTCCACCATTG 4098764
Query 8859 TCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAACTCCA 8918
| ||||| |||||||| || || |||||||| || | | || | ||||| |||||
Sbjct 4098765 TTTCACCAAAGATGGCACCTGGTCGTGGCTTTTCTACGAGAAGGCCTGGGTACAGCTCCA 4098824
Query 8919 CAGCCTCGATGTCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATTTCCTTTTCTCCTGT-T 8977
||| || ||||| || ||||| | ||||| || || ||||| |||||||||||
Sbjct 4098825 TAGCATCAATGTCGCCATAAAGCTCTTCCAGTTCAGCTGCCATTTCTTTTTCTCCTGTAA 4098884
Query 8978 TTATTAATAAAAATAA 8993
||||| || | || ||
Sbjct 4098885 TTATTGATGAGAAAAA 4098900
Score = 125 bits (138), Expect = 1e-23
Identities = 173/242 (71%), Gaps = 0/242 (0%)
Strand=Plus/Plus
Query 9622 ATGAGTCGAGTGGTCTGAAACAGTTGTTCGTCACTCCATTCTGGATGTTCTCGTTTCAGA 9681
||||| | | | || || ||||| || || ||| ||| |||||||| || |||||||
Sbjct 4100588 ATGAGCCTACTAGTTTGGAACAGCTGCTCATCATCCCACTCTGGATGCTCCTGTTTCAGG 4100647
Query 9682 ACATCGCACACTCTGTTGTGTTCCCTGAGCCAGATAGTAGCGTACATCATGAGACCAGGC 9741
| || || || | |||||||||||| ||||| || ||||| |||||||| | || ||
Sbjct 4100648 ATGTCACAGACCCGGTTGTGTTCCCTCAGCCATATTGTAGCATACATCATCAAGCCTGGG 4100707
Query 9742 ACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATATTTTCGGGCACTTCGGGAGGA 9801
|||| || || |||| || || |||| | ||| | ||| || || | |||||
Sbjct 4100708 ACCAAACCGAACACCTCCTGCCCAACAGAAAATTGCAGGTGTTCAGGTACATGAGGAGGG 4100767
Query 9802 TAGATCATGTGCACCTGGACATCTTTGACCGAGGGGGGATACATTTCACCGTCAATAATC 9861
|||||||| | |||| || || || | || ||||||||||| |||||||| |||
Sbjct 4100768 TAGATCATATCAGCCTGAGTGTCCTTCACTGTTGGTGGATACATTTCTCCGTCAATCATC 4100827
Query 9862 TG 9863
||
Sbjct 4100828 TG 4100829
>seq28
Length=10738426
Score = 109 bits (120), Expect = 8e-19
Identities = 131/178 (74%), Gaps = 0/178 (0%)
Strand=Plus/Plus
Query 8763 CTCCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGGAGCAGATGACGTTCGCCATGAGGC 8822
|||| ||||| || |||||||||||||| | |||||||||||| ||| | | || |
Sbjct 1123250 CTCCACCGAATGTACTGGGTTTCCAGTACTCTGGGGAGCAGATGGGGTTTCCAAGAAGCC 1123309
Query 8823 CTTTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGCTCTCACCGAAGATGGCGTTGGGAC 8882
| || |||||||||||||| || | ||| | ||||| || || || || | |||||
Sbjct 1123310 CCTTCAGGGAAAACGGAGCTCCGATCTCCACCATGCTTTCCCCAAAAATACCATTGGGTT 1123369
Query 8883 GGGGCTTTTCCACCAAGAATCCGGTGTACAACTCCACAGCCTCGATGTCTCCGTAAAG 8940
|||| || || | || || || | || ||||||| ||| || |||||||| || ||
Sbjct 1123370 GGGGTTTCTCAAGCAGCAAGCCCGGATAAAACTCCAGAGCATCAATGTCTCCATACAG 1123427
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 708514685808480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |