Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aquila_20chrysaetos_20canadensis_20[refseq_20GCF_5F000766835.1_20201 4-10-14] 1,142 sequences; 1,192,743,076 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq39 95.1 3e-14 >seq39 Length=9497852 Score = 95.1 bits (104), Expect = 3e-14 Identities = 123/168 (73%), Gaps = 4/168 (2%) Strand=Plus/Minus Query 111389 TACAAATGCAAATGAACTTGCAGCAAAAAATGTAAAAATTTGGGATGGAAATGGATCACG 111448 ||| ||||| || || || | |||||| ||| || |||||||||| ||||||||||| Sbjct 343800 TACGAATGCTAAAGAGCTCTCTGCAAAAGGTGTGAAGATTTGGGATGCTAATGGATCACG 343741 Query 111449 TGACTTTCTAGAT--TCAGTTGGTCTTGTCGACAACGAAGAAGGTGATCTCGGACCAGTT 111506 ||| || || ||| ||| ||| | | || || || || ||| | ||||||||| Sbjct 343740 TGAGTTCCTGGATAAGCAG--GGTTTCAGCACCAGAGAGGAGGGGGATTTGGGACCAGTT 343683 Query 111507 TACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAACCATGCAC 111554 || || || || ||| | |||||||| ||||| |||||| |||||| Sbjct 343682 TATGGTTTCCAGTGGAGGCACTTTGGAGCAGAATACAAAGATATGCAC 343635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303334529493044