Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aquila_20chrysaetos_20canadensis_20[refseq_20GCF_5F000766835.1_20201
4-10-14] 1,142 sequences; 1,192,743,076 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq99 127 1e-24
seq302 113 3e-20
seq260 109 4e-19
>seq99
Length=4051934
Score = 127 bits (140), Expect = 1e-24
Identities = 85/95 (89%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
||||||||||||||||||||||||||||| |||||||| ||||| || ||||||||
Sbjct 2963419 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGGTAGGGACAGTGGGAATCTCGT 2963360
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
| |||| ||||||||||||||||||||||||||||
Sbjct 2963359 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 2963325
>seq302
Length=58831
Score = 113 bits (124), Expect = 3e-20
Identities = 82/95 (86%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||| |||||||||||||||||||||| |||||||| ||||| || ||||| ||
Sbjct 24350 AAGCCCATTCCCTTGGCTGTGGTTTCGCTGGATAGTAGGTAGGGACAGTGGGAATCTTGT 24409
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
| ||| ||||||||||||||||||||||||||||
Sbjct 24410 TCGTCCATTCATGCGCGTCACTAATTAGATGACGA 24444
>seq260
Length=133905
Score = 109 bits (120), Expect = 4e-19
Identities = 81/95 (85%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
||||| |||| |||||||||||||| ||| ||||||| ||||| || ||||||||
Sbjct 119817 AAGCCTGTTCTCTTGGCTGTGGTTTTGCTGGATAGTAAGTAGGGACAGTGGGAATCTCGT 119758
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
| |||| ||||||||||||||||||||||||||||
Sbjct 119757 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 119723
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334942538163002
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |