Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aquila_20chrysaetos_20canadensis_20[refseq_20GCF_5F000766835.1_20201
4-10-14] 1,142 sequences; 1,192,743,076 total letters
Query= NC_009333.1
Length=137969
Score E
Sequences producing significant alignments: (Bits) Value
seq39 96.9 3e-15
>seq39
Length=9497852
Score = 96.9 bits (106), Expect = 3e-15
Identities = 119/163 (73%), Gaps = 0/163 (0%)
Strand=Plus/Plus
Query 20237 AGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGA 20296
|| || || ||||| |||| ||| ||||| | || |||||||||||||| || |||||
Sbjct 340011 AGCCCTGTGACATGGGCAATCATGTAAGTGAGCAGTGAATAGCTGGCAATATTGAAAGGC 340070
Query 20297 ACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCT 20356
||||| | ||||| ||||| ||||||||||| || || || || | |||||||
Sbjct 340071 ACTCCTAGTCCCATATCTCCAGACCTCTGATAGAGTTGGCAAGACAATTCACCGTTTAGA 340130
Query 20357 ACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCA 20399
||||| || || || | || || || || || |||||||
Sbjct 340131 ACATAGAACTGGCAAAGGGCATGGCATGGAGGCAGAGCCATCA 340173
Score = 87.8 bits (96), Expect = 2e-12
Identities = 102/135 (76%), Gaps = 2/135 (1%)
Strand=Plus/Plus
Query 20534 GCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCT-GTG 20592
|| ||||||||||||||||||||||| ||||| |||||||||||||||||| ||| |||
Sbjct 343654 GCTCCAAAGTGCCTCCACTGGAAACCATAAACTGGTCCCAAATCCCCCTCCTCTCTGGTG 343713
Query 20593 CGCCAGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGACTCC 20652
| | || || |||||||||| | || ||||| ||||| ||||| || ||
Sbjct 343714 C-TGAAACCCTGCTTATCCAGGAACTCACGTGATCCATTAGCATCCCAAATCTTCACACC 343772
Query 20653 TGTTCTTGAAAGCTC 20667
| || || |||||
Sbjct 343773 TTTTGCAGAGAGCTC 343787
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 441366499403280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |