Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aquila_20chrysaetos_20canadensis_20[refseq_20GCF_5F000766835.1_20201 4-10-14] 1,142 sequences; 1,192,743,076 total letters Query= NC_012783.2 Length=226205 Score E Sequences producing significant alignments: (Bits) Value seq69 149 9e-31 seq28 111 2e-19 >seq69 Length=6109482 Score = 149 bits (164), Expect = 9e-31 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 9739 GTTTGAAACAACTGCTCGTCACCCCATTCCGGGTGTTCGTGTTTGAGAACATCGCAGACC 9798 ||||| |||| |||||| ||| |||| || || || || ||||| || | || |||||| Sbjct 4100600 GTTTGGAACAGCTGCTCATCATCCCACTCTGGATGCTCCTGTTTCAGGATGTCACAGACC 4100659 Query 9799 CTGTTGTGTTCTCTCAGCCATATGGTGGCGTACATCATTAAACCCGGCACTAAACCAAAC 9858 | ||||||||| ||||||||||| || || |||||||| || || || || ||||| ||| Sbjct 4100660 CGGTTGTGTTCCCTCAGCCATATTGTAGCATACATCATCAAGCCTGGGACCAAACCGAAC 4100719 Query 9859 ACTTCATTCCCCACTGCAAAGCGCAGATCATCGGGCACTTCGGGCGCATACAGCATATGC 9918 || || | ||| || | ||| |||| | || || || | || | || | ||||| Sbjct 4100720 ACCTCCTGCCCAACAGAAAATTGCAGGTGTTCAGGTACATGAGGAGGGTAGATCATATCA 4100779 Query 9919 ACCTGGGTCTCTTTGACGGTGGGGGGATACATTTCACCGTCAATAACCTG 9968 |||| || || || || || || ||||||||||| |||||||| | ||| Sbjct 4100780 GCCTGAGTGTCCTTCACTGTTGGTGGATACATTTCTCCGTCAATCATCTG 4100829 Score = 141 bits (156), Expect = 1e-28 Identities = 209/296 (71%), Gaps = 0/296 (0%) Strand=Plus/Plus Query 8880 GGAACGCGGCCAACGGACATCCCTTCACATTGGCACAAATGAGGGACTGAATGGTTGCGG 8939 |||| || | || ||||| || ||||||||| || || || ||| | || || | Sbjct 4098585 GGAAAGCAGTGAAAGGACAGCCTTTCACATTGTTGCAGATAAGCTTCTGTAAGGAGGCAG 4098644 Query 8940 TTTTCACGATGTCTAAACCTACGTCCCCGCCGAAGGTGCTGGGTTTCCAGTACGCCGGGG 8999 | || | || || || || || | || || |||||||| || ||||||||| | |||| Sbjct 4098645 TATTGATTATTTCAAAGCCCACTTTTCCACCAAAGGTGCTAGGCTTCCAGTACTCAGGGG 4098704 Query 9000 AGCAGATGACGTTCGCCATGAGCCCTTTCAAGGAAAACGGAGCCCCCAGCTCGATGATGC 9059 ||||||| | || |||| || ||||||| || ||||| || || | ||| | || Sbjct 4098705 AGCAGATAGCATTTCCCATCAGTCCTTTCAGAGAGAACGGTGCTCCAATCTCCACCATTG 4098764 Query 9060 TCTCACCGAAGATGGCACCGGGACGCGGTTTTTCGACGATGAAGCCAGTGTAGAGTTCGA 9119 | ||||| ||||||||||| || || || ||||| |||| | ||| | ||| || || | Sbjct 4098765 TTTCACCAAAGATGGCACCTGGTCGTGGCTTTTCTACGAGAAGGCCTGGGTACAGCTCCA 4098824 Query 9120 CAGCCTCGACGTCGCCATAGAGGGCTTCCAACTCGGCAGCTATCTCCTTCTCACCT 9175 ||| || | ||||||||| || |||||| || || || || || || || ||| Sbjct 4098825 TAGCATCAATGTCGCCATAAAGCTCTTCCAGTTCAGCTGCCATTTCTTTTTCTCCT 4098880 Score = 84.2 bits (92), Expect = 3e-11 Identities = 93/124 (75%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 10840 CTTACGGGTCGAACAGTGCCGATCATAAAACCCCGTCCGCGTACAATCGCACCAATAACG 10899 |||||| || | ||||| ||||| | || |||| |||||| ||||| ||| | Sbjct 4103351 CTTACGTGTTGTACAGTTTTCTCCATAATATCCTGTCCACGTACAGTCGCATTCATACTG 4103410 Query 10900 ATCAAACCCCACCGTCATGCATACCCCTCGATTCTGGCACGGGTGCGAACAGCAAGGGTT 10959 |||||| || ||||||||||| |||| ||||| || |||| |||||||||||||| Sbjct 4103411 ATCAAATCCTGTTGTCATGCATACTCCTCTGTTCTGACAGGGGTTTGAACAGCAAGGGTT 4103470 Query 10960 GGCT 10963 |||| Sbjct 4103471 GGCT 4103474 >seq28 Length=10738426 Score = 111 bits (122), Expect = 2e-19 Identities = 171/244 (70%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 8935 TGCGGTTTTCACGATGTCTAAACCTACGTCCCCGCCGAAGGTGCTGGGTTTCCAGTACGC 8994 ||| || || || ||||| || || | || ||||| || ||||||||||||||| | Sbjct 1123221 TGCTGTCTTAACTATGTCAAAGCCAGTTGCTCCACCGAATGTACTGGGTTTCCAGTACTC 1123280 Query 8995 CGGGGAGCAGATGACGTTCGCCATGAGCCCTTTCAAGGAAAACGGAGCCCCCAGCTCGAT 9054 |||||||||||| ||| | | ||||| |||| |||||||||||| || | ||| | Sbjct 1123281 TGGGGAGCAGATGGGGTTTCCAAGAAGCCCCTTCAGGGAAAACGGAGCTCCGATCTCCAC 1123340 Query 9055 GATGCTCTCACCGAAGATGGCACCGGGACGCGGTTTTTCGACGATGAAGCCAGTGTAGAG 9114 ||||| || || || || || ||| | ||||| || | | ||||| | || | Sbjct 1123341 CATGCTTTCCCCAAAAATACCATTGGGTTGGGGTTTCTCAAGCAGCAAGCCCGGATAAAA 1123400 Query 9115 TTCGACAGCCTCGACGTCGCCATAGAGGGCTTCCAACTCGGCAGCTATCTCCTTCTCACC 9174 || | ||| || | ||| ||||| || |||||| ||| || || |||| | ||| || Sbjct 1123401 CTCCAGAGCATCAATGTCTCCATACAGCTCTTCCAGCTCTGCCGCCTTCTCTTCCTCTCC 1123460 Query 9175 TACA 9178 | || Sbjct 1123461 TGCA 1123464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 723717668782800