Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aquila_20chrysaetos_20canadensis_20[refseq_20GCF_5F000766835.1_20201
4-10-14] 1,142 sequences; 1,192,743,076 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq73 113 3e-19
seq44 95.1 9e-14
>seq73
Length=5915304
Score = 113 bits (124), Expect = 3e-19
Identities = 139/190 (73%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 518523 CAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 518582
|||||| |||||||||||||| |||||| |||| | || || ||||| |||||||
Sbjct 3896863 CAAAAACCGTATTGGTTGGATTCATTGCAACTTGGTTCTTTGCAGCATCGCCAATCAACC 3896804
Query 518583 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 518642
|| || ||||| || | ||| || ||| || || || ||||| || ||||| ||||
Sbjct 3896803 TCTCCGTATCTGTGAAGGCAACGTAGCTTGGCGTGGTCCGGTTACCCTGGTCATTGGCAA 3896744
Query 518643 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 518702
| ||||| || || |||| ||| ||||||| ||||| | | || || || | |||||
Sbjct 3896743 TGATTTCCACCTTCCCATGTTGGAATACACCAACACAGGAATAGGTGGTGCCAAGATCAA 3896684
Query 518703 TACCAATAGC 518712
| || | |||
Sbjct 3896683 TTCCGACAGC 3896674
Score = 105 bits (116), Expect = 5e-17
Identities = 360/554 (65%), Gaps = 18/554 (3%)
Strand=Plus/Minus
Query 517610 GCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAA 517669
|||||||| || ||||||||||||||||| | | | || || | ||| ||||||||
Sbjct 3898496 GCACCATAGGCCACAGCTTCATCAGGATTGATGCTCTTGTTCAGCTCTTTGCCATTGAAG 3898437
Query 517670 AAATTTGAAAGAAGTTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAAT 517728
|| | || |||| ||| | ||| || ||||||| || || ||||| | || ||
Sbjct 3898436 AAGTCCTGCAGCAGTT-TCTGAATCTTTGGGATACGAGTAGACCCACCAACCAGCACGAT 3898378
Query 517729 TTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAG 517788
||||| | ||| ||||| || ||||| | |||| | | ||||| || || || ||
Sbjct 3898377 GTCATGGATCTGCGATTTGTCGAGTTTGGCATCCCGCAGGGCCTTTTCCACAGGATCCAG 3898318
Query 517789 ACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAA--GA-GTGAC 517845
| | | |||| ||| | | || ||||| || |||||| |||| || |||
Sbjct 3898317 AGTGCCACGGAACAGGTCAGCATTCAGCTCTTCAAAGCGAGCTCTGGTAATGGATGTG-- 3898260
Query 517846 ATTATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAG 517904
|| || ||||| || || | | |||||||| ||| || | | || || |||||
Sbjct 3898259 --TAGAAGTCAATACCCTCATAGAGAGAATCAATTTCGATACTGGCCTGCGTGCTAGAAG 3898202
Query 517905 ATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGG----CTTTTGCT 517960
| || | ||| || ||||| || || || || | || | || | | ||| | ||
Sbjct 3898201 ACAGAGTACGCTTTGCACGCTCGCAAGCAGTGCGGAGGCGACGAACTGCTCTCTTGTTCT 3898142
Query 517961 GATTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGA 518020
|||| ||| | || | || | |||||| || ||| | | || |
Sbjct 3898141 CGCTGAT----GTCTTTCTTGTGCTTGCGCTTGAATTCAGCAATGAAGTGGTTGACCATG 3898086
Query 518021 CGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAA 518080
|| || ||||| ||||| || ||||| | ||| | |||| || | | | || | ||
Sbjct 3898085 CGGTTGTCAAAGTCTTCTCCACCCAAGTGAGTGTCACCTGCAGTGGATTTCACCTCAAAG 3898026
Query 518081 AGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATA 518140
| |||||||||| | || || | |||||| ||| ||||| || | || || |||
Sbjct 3898025 ATGCCATCTTCAATGGTCAGAATTGACACATCAAAGGTGCCACCTCCAAGGTCGAAGATA 3897966
Query 518141 AGTACATTCATTTC 518154
|| |||||| ||||
Sbjct 3897965 AGAACATTCCTTTC 3897952
>seq44
Length=8792945
Score = 95.1 bits (104), Expect = 9e-14
Identities = 94/122 (77%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 366997 GTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTATTCAT 367056
|| || ||| | ||||| || ||||| || |||||| | ||| | | | |||||||||
Sbjct 3199877 GTGGCTACAGTGGCATTCGGAATGGGCATCAATAAAGCAGATATCCGGATGGTTATTCAT 3199818
Query 367057 TATGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCGTGAT 367116
|| || || || ||| | || ||| ||||||||||||||||| ||||| |||||||||
Sbjct 3199817 TACGGTGCCCCTAAGGAAATGGAATCCTATTATCAAGAAATTGGGAGAGCTGGTCGTGAT 3199758
Query 367117 GG 367118
||
Sbjct 3199757 GG 3199756
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3780765730198252
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |