Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aquila_20chrysaetos_20canadensis_20[refseq_20GCF_5F000766835.1_20201 4-10-14] 1,142 sequences; 1,192,743,076 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq92 307 1e-78 seq73 205 1e-47 >seq92 Length=4479760 Score = 307 bits (340), Expect = 1e-78 Identities = 1037/1598 (65%), Gaps = 34/1598 (2%) Strand=Plus/Plus Query 6568 TTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGA 6627 ||| || || |||| || || || || ||||| ||||| |||||||| || || | Sbjct 2067459 TTCGTCCTCCGCTTTGTATTTCTCTGCTTCTTGCACCATACGGTCAATGTCATCCTT-GC 2067517 Query 6628 TAAT-CTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTT 6686 ||| | ||||| ||||| || || || ||||| | ||||||| | ||| || Sbjct 2067518 TAAGGCGACCCTTGTCATTGGTGATGGTGATCTTGTTCTCCTTACCCGTGCTCTTGTCCA 2067577 Query 6687 CAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTG 6746 | || || ||||||| |||||||| ||||| | || || | || | || || || Sbjct 2067578 CGGCGCTGACATTCAGGATACCATTGGCATCGATGTCAAAAGTGACCTCGATCTGGGGGA 2067637 Query 6747 TACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCG 6806 || | ||||| | || || ||||||| |||||| |||| || || |||| ||| Sbjct 2067638 CTCCGCGGGGTGCCGGGGGGATGCCCGTTAGGTCAAATTTACCCAGCAAGTTGTTGTCCT 2067697 Query 6807 TCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGT-TGATTATCTTGT 6865 ||| | | | || || || || || | | || || | | || || || Sbjct 2067698 TCGTCATAGCCCTCTCGCCCTCGTACACCTGGACCAGGAC-GCTGCTCTGGTTGTCAGAG 2067756 Query 6866 GCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGG 6925 || | |||| | || || || | ||||| || || || | | || | | Sbjct 2067757 TAGGTGGTGAAGGTCTGAGTTTGTTTGGTGGGAATGGTGGTGTTGCGCTTGATGAGGGCC 2067816 Query 6926 GTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAAC 6985 ||||| | |||||| || |||| || || |||||||| || || ||||| || | | Sbjct 2067817 GTCATCACACCACCAGCTGTCTCGATGCCCAGGGACAGAGGGGTGACATCCAACAGCAGC 2067876 Query 6986 AGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCG 7045 || || || ||| || | || ||| | | ||| || ||||| || | || || Sbjct 2067877 AGATCCTGCACATTCTCAGACTTGTCTCCCATGAGGATAGCCGCTTGCACAGCAGCGCCA 2067936 Query 7046 TATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCC 7105 || || || |||||||||||||| || | || || || ||||| || || || | ||| Sbjct 2067937 TAAGCAACAGCCTCATCGGGGTTGATGCTCTTGTTGAGCTCTTTGCCATTGAAGAAGTCC 2067996 Query 7106 GATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTC 7165 || || | ||| || || ||||| || || || ||||| |||| ||||| || | Sbjct 2067997 TGTAGCAGCTTTTGGATCTTGGGGATACGAGTGGAGCCACCCACCAGCACGATCTCCTGG 2068056 Query 7166 ACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTA 7225 | | || || | ||| | || || || | || || || || |||| | Sbjct 2068057 ATCTGGCCCTTGTCTAGCTTGGCATCGCGCAGAGCCTTCTCCACTGGCTCCAGGGTGCCA 2068116 Query 7226 CGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCA 7285 ||||| | || | || ||||| || || ||||| |||||||| || ||||| ||| Sbjct 2068117 CGGAAGAGATCGGCATTGAGCTCCTCGAAGCGGGCACGAGTAATGGAGGTGTAGAAGTCA 2068176 Query 7286 ACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGA---TAACGTT 7342 | ||| ||||| | || || || |||||| | | ||| ||| ||||| | || Sbjct 2068177 ATGCCCTCGTAGAGGGAGTCGATCTCAATGCTAGCTTG---CGTGGAAGAGCTGAGGGTG 2068233 Query 7343 CGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATA 7402 ||||| || | |||||| || || || | || | | || ||| ||| || | ||| Sbjct 2068234 CGCTTCGCCCTCTCACAAGCTGTACGCAGTCGCCTCACCGCTCGCTTGTTGCCAGCAATG 2068293 Query 7403 TCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAA 7462 || ||| || ||||| || || |||||| || || | | | || || Sbjct 2068294 TCGCGCTTGTGCTTACGCTTGAATTCTTCAACAAAATGGTTCACCATGCGGTTGTCAAAG 2068353 Query 7463 TCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCA 7522 || || ||||||| ||| || || || || || | || || |||||||| || | ||| Sbjct 2068354 TCCTCCCCACCCAGGTGGGTGTCACCAGCTGTGGACTTCACCTCAAAGATGCCATCCTCA 2068413 Query 7523 ATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTA 7582 ||| | | | || |||||||| || || || |||| |||||| ||||| |||||| | Sbjct 2068414 ATGGTAAGGATGGATACATCAAAAGTGCCCCCTCCCAAGTCAAAGATGAGCACGTTCTTC 2068473 Query 7583 TCGTCGTCTTTG------TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || | | | ||||| || | || || || ||||| || || || || || Sbjct 2068474 TCTCCAGCCCGGGTACCTTTCTTGTCCAAGCCATAGGCTATAGCAGCTGCTGTGGGCTCG 2068533 Query 7637 TTAATAATACG-AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || ||||| || | ||| || ||||||| || || | || ||||| || || || || Sbjct 2068534 TTGATAATGCGCATCACA-TTAAGGCCAGTGATGGTGCCAGCGTCTTTGGTGGCCTGGCG 2068592 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 || || ||||| |||||||| || || || | ||| || | | || || || || Sbjct 2068593 CTGGGAGTCGTTGAAGTAGGCAGGCACTGTGATGACAGCATTCTGCACCTTGCGCCCCAG 2068652 Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGC 7815 ||| | || ||||| || ||||| |||||||| ||||| || ||||| || | | Sbjct 2068653 ATAGGCCTCAGCGATCTCCTTCATCTTGGTAAGGACCATGGAGCTGATCTCCTCTG-GGA 2068711 Query 7816 AAACTGT-TTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGG 7874 | | || ||| | ||||| || | || |||| | | |||| || || |||| Sbjct 2068712 AGAAGGTCTTCATCTCACCCTTGTACTCCACTTGCACCTTGGGCTT----GC--CACCCT 2068765 Query 7875 GGATAACCTTA---TACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACT 7931 | | ||| | | | ||| | ||||| || | || ||| |||| ||| Sbjct 2068766 CGTTCACCACACGGAAGGGCCAGTGCTTCATGTCAGCCTGCACCGTGGGGTCATCGTACT 2068825 Query 7932 TTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGT 7991 | | ||||| |||||||| |||||||| | ||||| | || ||||| || |||| Sbjct 2068826 TGCGGCCGATGAGACGCTTGGCATCAAAGATGGTGTTGGTAGGATTCATAGCCACCTGGT 2068885 Query 7992 TCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGG- 8050 |||| || ||||| ||||| || || || || || || || || ||||| | |||| Sbjct 2068886 TCTTGGCGGCGTCGCCGATGAGGCGCTCCGTA---TCGGTGAAGGCCACGTA-GCTGGGC 2068941 Query 8051 GTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCG 8110 || || || || || |||||||| || || || || || | | | || |||| || Sbjct 2068942 GTGGTGCGGTTGCCCTGGTCGTTGGCGATGATCTCCACTTTGCCATGCTGAAAGACACCC 2069001 Query 8111 ACGCACGAATACGTTGTTCCTAAATCAATACCGATTGC 8148 ||||| || ||||| || || || || || |||||||| Sbjct 2069002 ACGCAGGAGTACGTGGTGCCCAAGTCGATGCCGATTGC 2069039 >seq73 Length=5915304 Score = 205 bits (226), Expect = 1e-47 Identities = 373/543 (69%), Gaps = 6/543 (1%) Strand=Plus/Minus Query 7040 GCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAA 7099 || || || || || || ||||| || || || | || ||||| ||||| || || || Sbjct 3898496 GCACCATAGGCCACAGCTTCATCAGGATTGATGCTCTTGTTCAGCTCTTTGCCATTGAAG 3898437 Query 7100 TAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATT 7159 | ||| | || || ||||| || ||||| || || || ||||| |||| ||||| Sbjct 3898436 AAGTCCTGCAGCAGTTTCTGAATCTTTGGGATACGAGTAGACCCACCAACCAGCACGATG 3898377 Query 7160 TCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATA 7219 |||| | | |||||| |||| || | || || || | ||||| ||||| |||| | Sbjct 3898376 TCATGGATCTGCGATTTGTCGAGTTTGGCATCCCGCAGGGCCTTTTCCACAGGATCCAGA 3898317 Query 7220 CATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAG 7279 |||||||| ||| | ||| || ||||| || || | |||||||||||| ||| Sbjct 3898316 GTGCCACGGAACAGGTCAGCATTCAGCTCTTCAAAGCGAGCTCTGGTAATGGATGTGTAG 3898257 Query 7280 AAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAAC 7339 || |||| || || || | ||||||||||| || | | || | | ||||| | Sbjct 3898256 AAGTCAATACCCTCATAGAGAGAATCAATTTCGATACTGGCCTGCGTGCTAGAAGACAGA 3898197 Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399 || |||||||| ||||| || || || || | ||||||| || | | ||| || Sbjct 3898196 GTACGCTTTGCACGCTCGCAAGCAGTGCGGAGGCGACGAACTGCTCTCTTGTTCTCGCTG 3898137 Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGT-GTCGA--AGGAGTCTCGAA 7456 || |||||||| || || || || || || || ||||| || || | | | | Sbjct 3898136 ATGTCTTTCTTGTGCTTGCGCTTGAATTCAGCAATGAAGTGGTTGACCATGCGGTT---G 3898080 Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || ||||| ||||||||||| || || || || || | ||| || |||||||| || Sbjct 3898079 TCAAAGTCTTCTCCACCCAAGTGAGTGTCACCTGCAGTGGATTTCACCTCAAAGATGCCA 3898020 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 |||||||| | | | || |||||||| || ||||| || ||||| || || || || Sbjct 3898019 TCTTCAATGGTCAGAATTGACACATCAAAGGTGCCACCTCCAAGGTCGAAGATAAGAACA 3897960 Query 7577 TTC 7579 ||| Sbjct 3897959 TTC 3897957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635123733479280