Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aquila_20chrysaetos_20canadensis_20[refseq_20GCF_5F000766835.1_20201
4-10-14] 1,142 sequences; 1,192,743,076 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq73 122 7e-22
>seq73
Length=5915304
Score = 122 bits (134), Expect = 7e-22
Identities = 115/147 (78%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450
||||| |||| || | ||||||||||| ||||| |||||||| || ||||| |||||
Sbjct 3897693 GTTACTAATGCTGTGGTGACTGTACCAGCCTATTTCAATGACTCTCAGCGTCAGGCTACA 3897752
Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510
||||| |||||| ||||| || || ||||| || || ||||||||||| || || |||
Sbjct 3897753 AAAGACGCTGGAACCATTGCAGGGCTCAATGTACTGCGAATTATCAATGAGCCGACAGCT 3897812
Query 550511 GCTGCACTTGCATATGGACTTGATAAA 550537
||||| | || ||||| || || |||
Sbjct 3897813 GCTGCGATAGCCTATGGTCTGGACAAA 3897839
Score = 100 bits (110), Expect = 2e-15
Identities = 139/193 (72%), Gaps = 4/193 (2%)
Strand=Plus/Plus
Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050
|||| | || || ||| | || ||||| ||| ||||||||||| | ||| |||| ||
Sbjct 3896673 AGCTGTCGGAATTGATCTTGGCACCACCTATTCCTGTGTTGGTGTATTCCAACATGGGAA 3896732
Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110
|| ||||| ||||||||||| || |||||| | || || ||| || ||| | |||||
Sbjct 3896733 GGTGGAAATCATTGCCAATGACCAGGGTAACCGGACCACGCCAAGCTACGTTGCCTTCAC 3896792
Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAG--CCACTGGTAATCCTACC 550168
|| || || || |||| ||||| ||||| | |||| || || ||||| |||
Sbjct 3896793 AGATACGGAGAGGTTGATTGGCGATGCTGCAAAGAACCAAGTTGCAATG--AATCCAACC 3896850
Query 550169 AATACTATTTTTG 550181
||||| ||||||
Sbjct 3896851 AATACGGTTTTTG 3896863
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029235605889580
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |