Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aquila_20chrysaetos_20canadensis_20[refseq_20GCF_5F000766835.1_20201 4-10-14] 1,142 sequences; 1,192,743,076 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq73 122 7e-22 >seq73 Length=5915304 Score = 122 bits (134), Expect = 7e-22 Identities = 115/147 (78%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450 ||||| |||| || | ||||||||||| ||||| |||||||| || ||||| ||||| Sbjct 3897693 GTTACTAATGCTGTGGTGACTGTACCAGCCTATTTCAATGACTCTCAGCGTCAGGCTACA 3897752 Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510 ||||| |||||| ||||| || || ||||| || || ||||||||||| || || ||| Sbjct 3897753 AAAGACGCTGGAACCATTGCAGGGCTCAATGTACTGCGAATTATCAATGAGCCGACAGCT 3897812 Query 550511 GCTGCACTTGCATATGGACTTGATAAA 550537 ||||| | || ||||| || || ||| Sbjct 3897813 GCTGCGATAGCCTATGGTCTGGACAAA 3897839 Score = 100 bits (110), Expect = 2e-15 Identities = 139/193 (72%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 |||| | || || ||| | || ||||| ||| ||||||||||| | ||| |||| || Sbjct 3896673 AGCTGTCGGAATTGATCTTGGCACCACCTATTCCTGTGTTGGTGTATTCCAACATGGGAA 3896732 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 || ||||| ||||||||||| || |||||| | || || ||| || ||| | ||||| Sbjct 3896733 GGTGGAAATCATTGCCAATGACCAGGGTAACCGGACCACGCCAAGCTACGTTGCCTTCAC 3896792 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAG--CCACTGGTAATCCTACC 550168 || || || || |||| ||||| ||||| | |||| || || ||||| ||| Sbjct 3896793 AGATACGGAGAGGTTGATTGGCGATGCTGCAAAGAACCAAGTTGCAATG--AATCCAACC 3896850 Query 550169 AATACTATTTTTG 550181 ||||| |||||| Sbjct 3896851 AATACGGTTTTTG 3896863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029235605889580