Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aquila_20chrysaetos_20canadensis_20[refseq_20GCF_5F000766835.1_20201
4-10-14] 1,142 sequences; 1,192,743,076 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq39 102 7e-17
seq55 87.8 1e-12
>seq39
Length=9497852
Score = 102 bits (112), Expect = 7e-17
Identities = 136/184 (74%), Gaps = 4/184 (2%)
Strand=Plus/Plus
Query 30150 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30209
||| || |||| |||||||| || |||||||||||||| || || || ||||||| ||
Sbjct 343638 CATATCTTTGTATTCTGCTCCAAAGTGCCTCCACTGGAAACCATAAACTGGTCCCAAATC 343697
Query 30210 TCCCTCTTCCCT-GTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGT 30268
||||| || || ||||| ||| ||| ||| |||| || || | || || || || |
Sbjct 343698 CCCCTCCTCTCTGGTGCT-GAAACCCTGCTTATCCAGGAACTCACGTGATCCATTAGCAT 343756
Query 30269 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACC 30328
|||| ||||| || || || | ||||||||||| | || || || || || || || |
Sbjct 343757 CCCAAATCTTCACACCTTTTGCAGAGAGCTCTTTAGCATTCGTAGAACC-CT-ACAAAAC 343814
Query 30329 ACAG 30332
||||
Sbjct 343815 ACAG 343818
>seq55
Length=7031396
Score = 87.8 bits (96), Expect = 1e-12
Identities = 84/108 (78%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 112102 TTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 112161
|| |||||||||||||| |||| || || ||| || | | ||| | |||||| || ||
Sbjct 6882431 TTGAGCTCCCTGCTGAGCACTATATTAATTCTGCCTTTTAAAGGACGATTCTTCTCAGGA 6882372
Query 112162 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 112209
||||||||||| || ||| |||||||||||| | ||||| || |||
Sbjct 6882371 ATGGAGAACCAGGTTTTTTTACCCATTATCAGTGCATTCTGTTTACCT 6882324
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408611912809166
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |