Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aquila_20chrysaetos_20canadensis_20[refseq_20GCF_5F000766835.1_20201 4-10-14] 1,142 sequences; 1,192,743,076 total letters Query= NC_020474.2 Length=180421 Score E Sequences producing significant alignments: (Bits) Value seq23 217 2e-51 seq4 181 1e-40 >seq23 Length=12524172 Score = 217 bits (240), Expect = 2e-51 Identities = 597/909 (66%), Gaps = 7/909 (1%) Strand=Plus/Minus Query 160045 TGTGTCGCAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATT 160104 ||||||||| || || |||| ||||| || || || |||||| || ||| || | Sbjct 3182627 TGTGTCGCAAATACTCTTCCAAACATTTCACTGCAAAAGGGTCAACATCAGTGTCAAACT 3182568 Query 160105 TATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACA 160164 |||| || || | ||||| ||| |||| |||||| || |||||| ||| || | Sbjct 3182567 TATTAGCAAAGAAGTGGTG---GTTTCGTAGCATCCAGCTCAGGTCTCCTACCCCAAAAA 3182511 Query 160165 CGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGT 160224 | ||||| || || | || || || |||| || ||||| | || ||||| | ||||| Sbjct 3182510 CACAGACAGAGCGAACATGAACTCCACTGCACGGTGGGTAGGGTGCACCTTTGGACACGT 3182451 Query 160225 CACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGT 160284 ||||||| ||||||||||||| |||||||| || | || | |||||| || |||| Sbjct 3182450 CACCTTCAAAGTACTGCCACTTGACAAACCTTGCCAGTGCATTCATGTCAGAAACATCGT 3182391 Query 160285 ATTTGTACATCAG-GGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCAC 160343 | |||| || || | ||| ||||| || || | || || | ||| | || ||||| Sbjct 3182390 ACTTGT-CACTAGAAGAAACTGCACCTGGGACTTCAGGTATTCTCTGAATTGTTGCCCAT 3182332 Query 160344 AGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAACCTG 160403 |||| || || |||||||| ||||| || | ||| || ||||||| ||| ||| Sbjct 3182331 AGGTACTCATCTGGGCTGTAAGTGTCTTTTGCCCACTCAATGAACTTAAGTATTTTACTG 3182272 Query 160404 TCCCGCAGAACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAAT 160463 || |||| | | |||| | || ||||| || || || || || || Sbjct 3182271 CTTTCTAGTACGTATTCTGCAAATCTTCTGCTAACTACAAAATAGGCACTACCAGAAAAA 3182212 Query 160464 ATCGGTATGGGTATAGGCGGCGTGTCTTTGTCCTGACCGGTGTTAGACACCACTCCTTTC 160523 || || | | ||| || | |||||| || ||||| | || | Sbjct 3182211 ATTGGAGTACTGAGAGGTGGTAGTTGTTTGTCTATGCCTGTGTTCTTTATTTTACCATCA 3182152 Query 160524 ACCAGCGCGTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGTTCCGTCTCT 160583 | | | | || | || |||||||| || || | ||||| ||| || || Sbjct 3182151 ATAATCTCATGGTGTTTTTTCCACCTTACTTCTTTATAAACAGGCATTTTTTCTGTTTCC 3182092 Query 160584 AGACTGTTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGAGC 160643 | ||||| |||| | || | ||| | | || || || || |||| ||||| | Sbjct 3182091 AAGCTGTTTTCACCTTTAAGAGCTTTTAATTTCTCTACTATTTCCTGGTTGGTCTTTATA 3182032 Query 160644 GGAAAGTCGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTGCAGG 160703 |||||||| || || | |||||| | ||| ||||| || | || || || Sbjct 3182031 GGAAAGTCCAGGCCACAGAGGTTTATTAGGTATTTCCAGTTTGAACTTCTTCTGTAGAGA 3181972 Query 160704 TCCCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTCT 160763 || ||||||| ||||| ||||||||||| | |||||| ||||| || || || ||||| Sbjct 3181971 TCTTTCATGCAGTTAATGTCTGCCTGCACCCTGCTCCATGAAGCATATACAACACTCTCT 3181912 Query 160764 AGTTTACTGGCCACAAAGACGTTATCGAAACACGACACGATTCCCACCACCGCCAGAAAG 160823 | | |||| | |||||| ||||| ||||| || || |||||| ||| | ||| || Sbjct 3181911 AACTGGCTGGAAATAAAGACATTATCAAAACATGAGACTATTCCCTTCACAG-CAGCAAA 3181853 Query 160824 AACATCTTAT-CCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTAGAT 160882 || | || | | |||| ||| || || | || || | |||||||| || ||||| Sbjct 3181852 AAAAGATTCTGGAGACTTTTTGTCAACATGAATACAGTAAAAATTCTGAGGGGCATAGAT 3181793 Query 160883 GGCCCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGCTAT 160942 | || || | || || | |||||| || || |||| | ||| || ||||| || || Sbjct 3181792 TGATCTTAGAAGTCTATCAAGCATCTCAATTTTGTGATAAACCACTATTGAGTAAGCAAT 3181733 Query 160943 CGGAAACTC 160951 ||||| || Sbjct 3181732 TGGAAATTC 3181724 >seq4 Length=24539817 Score = 181 bits (200), Expect = 1e-40 Identities = 615/944 (65%), Gaps = 42/944 (4%) Strand=Plus/Plus Query 160044 CTGTGTCGCAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAAT 160103 ||||| ||||| || || || || || |||| |||| ||| ||| |||||| Sbjct 5979237 CTGTGGCGCAGGTGCTCCTCGAGGCACTGGATGGCGGCGTTGTCCACGAGGGGGTCGAAC 5979296 Query 160104 TTATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAAC 160163 || || || || || ||||| | ||| || | |||| ||||||| || | |||| | Sbjct 5979297 TTGTTGGCCAAGAGGTGGTGC---TGCTGGAGCAACCAGGGCACGTCGCCCGCCCCGTAG 5979353 Query 160164 ACGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACG 160223 | |||||||| || |||| |||| |||| |||||||| | || || || | Sbjct 5979354 ATACAGACGGAGCGCTGGTGCTGGCCGGTGCAGGGCGGGTAGGGCGCGCCCTTGCTGGTG 5979413 Query 160224 TCACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCG 160283 || || || |||||||||||| || | | || | || | |||||| ||| | | Sbjct 5979414 TCGCCCTCCAGGTACTGCCACTTGACCAGGCGGGGCAGGGCGTTCATGTCCGAGAGCTGG 5979473 Query 160284 TATTTGTACATCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCAC 160343 | |||| || |||| ||| || || ||||||||||| || | ||||||||||| Sbjct 5979474 AACTTGTCATTCTGGGGCGTGGCGCCCGGCACGCCGGGCATGCGGTTGAGGGTGGCCCAG 5979533 Query 160344 AGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACT-CTCCGATTAACCT 160402 | ||||||||| |||||||| |||||||| | ||| || | ||||| || || | | Sbjct 5979534 ACGTGTTCGTCAGGGCTGTAGGTGTCCTTGGCCCACTCGAGGAACTGCTGCG----CCGT 5979589 Query 160403 G----TCCCGCAGAACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGG 160458 | || | || | || ||| ||| | || || |||| ||||||| |||| | Sbjct 5979590 GGGGTTCTCAAAG-ATGTACTGCACGAAGGCCCGCGTGACCACAATGTACGCGTTGCCCG 5979648 Query 160459 AGAATATCGG-TA--TGGGTATAGGCGG-CGTGTCTTTGT-CCTGACCGGTGTTAGACAC 160513 ||| || || || || | ||||| || ||| ||| ||| |||| || || Sbjct 5979649 TGAACATGGGATAGTTGTGGGGTGGCGGAGGTTTCTCTGTGGCTGTCCGGAAGATGA-AC 5979707 Query 160514 CACTCCTTTCACCAGCGCGTGTCGCTTCTTCCACCTGACCATCTTGTG--CGGTGGCATG 160571 ||| ||| ||| | | || ||| | || |||| | | | ||| | Sbjct 5979708 -------TTCCCCACTTGGTGGTGGTACTGCCAGCGCGCCCGCTTGGGGCCCGAGGCCTT 5979760 Query 160572 CGTTCCGTCTCTAGACTGTTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGG 160631 | || | ||| | ||||| || | ||| ||||| ||||||||| | | Sbjct 5979761 C--TCTGACTCCATGCTGTTCCGCCCCTGCAGCACCTTCAGGGCACGGACGATCTCGACG 5979818 Query 160632 TTCGTCTTGAGCGGAAAGTCGGTACCGCACAAGTTTATCACGTACTTCCA---TTTCGCG 160688 || ||||||| || || ||||| ||||| ||| | ||||| ||| | | | Sbjct 5979819 TTGGTCTTGATGGGGAAATCGGTGCCGCAGGTGTTGAGGACGTAGCGCCACGGCATGGGG 5979878 Query 160689 CTCAGGTCGTGCAGGTCCCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCG 160748 ||| | |||||||| |||||| || | || ||||||| ||| |||||| ||| Sbjct 5979879 CTC---TGCAGCAGGTCCTGCATGCAGTTGAGGTCAGCCTGCAGCCGGGACCAGGAGGCG 5979935 Query 160749 TACACTACGTTCTCTAGTTTACTGGCCACAAAGACGTTATCGAAACACGACACGAT---T 160805 ||||| || | || | || |||||||||||||| ||| || | |||||| Sbjct 5979936 TACACCACCTCTTCCAAGCGGCTCGCCACAAAGACGTTGGGGAAGCAGGCCACGATGGCC 5979995 Query 160806 CCCACCACCGCCAGAAAGAACATCTTATCCGCCTTTCGGTCCACGTGCACGCAATACAGG 160865 | ||| || || | ||| | | | ||| | ||| ||||| ||||| || | | Sbjct 5979996 CGCACGGCCTCCTGGAAGGCGGCCGGA---GACTTGCTGTCGACGTGGACGCAGTAGACG 5980052 Query 160866 TTCTGAGGCGCGTAGATGGCCCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATC 160925 ||||| || ||||||| || | || | || ||| |||||||| || || | ||||| Sbjct 5980053 TTCTGGGGGGCGTAGAGGGAGCGCAGGAGCCGCTCAAACATCTCGATTTTGTTGTGGATG 5980112 Query 160926 ACGATAGAGTAGGCTATCGGAAACTCGGTCTCCTCGCGACTCAG 160969 || || |||||||| || || ||||| | |||||| | ||||| Sbjct 5980113 ACCATGGAGTAGGCGATGGGGAACTCCGCCTCCTCCTGGCTCAG 5980156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577210960195920