Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aquila_20chrysaetos_20canadensis_20[refseq_20GCF_5F000766835.1_20201
4-10-14] 1,142 sequences; 1,192,743,076 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq80 84.2 1e-11
seq36 82.4 5e-11
>seq80
Length=5371318
Score = 84.2 bits (92), Expect = 1e-11
Identities = 160/233 (69%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 33519 GTCACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATC 33578
|| |||||| ||||| || | ||| | ||| || ||| || || || |||||||| ||
Sbjct 4804744 GTTACCACCCCTCAAGCGCAGCACAAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTC 4804803
Query 33579 GGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTG 33638
|| || ||||| | || |||| || || || ||||| |||| | ||||||||| |
Sbjct 4804804 AGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGG 4804863
Query 33639 CGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATT 33697
|| | ||||| ||||| || || || | ||| ||| |||||| || | |
Sbjct 4804864 GGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGA-CATTCTCAATGGTGTCACTGGGCT 4804922
Query 33698 CCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || || | || || || || || || | || || |||||||||||||||
Sbjct 4804923 CAACTTCCAGGGTTATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATA 4804975
>seq36
Length=10026654
Score = 82.4 bits (90), Expect = 5e-11
Identities = 135/192 (70%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618
|| || || |||||||| ||||| || ||||| | || |||| || || || |||||
Sbjct 5148304 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCATCTTCCAGCTGCTTGCCAGCAAAG 5148245
Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678
|||| | ||||||||| | || | ||||| ||||| || || || | |||
Sbjct 5148244 ATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGA-CATT 5148186
Query 33679 GTCAC-GGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737
||| |||||| || | ||| || |||| ||||| || || || || | || || ||
Sbjct 5148185 CTCAATGGTGTCACTGGGTTCAACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCAC 5148126
Query 33738 AAAGATCTGCAT 33749
||||||||||||
Sbjct 5148125 AAAGATCTGCAT 5148114
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328699425056640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |