Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aquila_20chrysaetos_20canadensis_20[refseq_20GCF_5F000766835.1_20201 4-10-14] 1,142 sequences; 1,192,743,076 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq80 84.2 1e-11 seq36 82.4 5e-11 >seq80 Length=5371318 Score = 84.2 bits (92), Expect = 1e-11 Identities = 160/233 (69%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 33519 GTCACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATC 33578 || |||||| ||||| || | ||| | ||| || ||| || || || |||||||| || Sbjct 4804744 GTTACCACCCCTCAAGCGCAGCACAAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTC 4804803 Query 33579 GGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTG 33638 || || ||||| | || |||| || || || ||||| |||| | ||||||||| | Sbjct 4804804 AGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGG 4804863 Query 33639 CGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATT 33697 || | ||||| ||||| || || || | ||| ||| |||||| || | | Sbjct 4804864 GGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGA-CATTCTCAATGGTGTCACTGGGCT 4804922 Query 33698 CCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || || | || || || || || || | || || ||||||||||||||| Sbjct 4804923 CAACTTCCAGGGTTATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATA 4804975 >seq36 Length=10026654 Score = 82.4 bits (90), Expect = 5e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618 || || || |||||||| ||||| || ||||| | || |||| || || || ||||| Sbjct 5148304 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCATCTTCCAGCTGCTTGCCAGCAAAG 5148245 Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678 |||| | ||||||||| | || | ||||| ||||| || || || | ||| Sbjct 5148244 ATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGA-CATT 5148186 Query 33679 GTCAC-GGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737 ||| |||||| || | ||| || |||| ||||| || || || || | || || || Sbjct 5148185 CTCAATGGTGTCACTGGGTTCAACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCAC 5148126 Query 33738 AAAGATCTGCAT 33749 |||||||||||| Sbjct 5148125 AAAGATCTGCAT 5148114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328699425056640