Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aquila_20chrysaetos_20canadensis_20[refseq_20GCF_5F000766835.1_20201
4-10-14] 1,142 sequences; 1,192,743,076 total letters
Query= NC_026141.2
Length=4988
Score E
Sequences producing significant alignments: (Bits) Value
seq362 123 8e-25
seq256 123 8e-25
seq335 118 3e-23
seq285 118 3e-23
seq93 118 3e-23
seq142 98.7 3e-17
seq58 98.7 3e-17
>seq362
Length=20194
Score = 123 bits (136), Expect = 8e-25
Identities = 71/73 (97%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
|||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct 7157 GGCTGAAGTAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 7098
Query 2828 CCCGGGCTTCAGC 2840
|||||||||||||
Sbjct 7097 CCCGGGCTTCAGC 7085
>seq256
Length=185481
Score = 123 bits (136), Expect = 8e-25
Identities = 71/73 (97%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
|||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct 101779 GGCTGAAGTAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 101838
Query 2828 CCCGGGCTTCAGC 2840
|||||||||||||
Sbjct 101839 CCCGGGCTTCAGC 101851
>seq335
Length=27982
Score = 118 bits (130), Expect = 3e-23
Identities = 70/73 (96%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
|||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| |
Sbjct 11948 GGCTGAAGTAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCATC 12007
Query 2828 CCCGGGCTTCAGC 2840
|||||||||||||
Sbjct 12008 CCCGGGCTTCAGC 12020
>seq285
Length=89717
Score = 118 bits (130), Expect = 3e-23
Identities = 70/73 (96%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
|||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct 50863 GGCTGAAGTAGCTCAGCTGGGACAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 50804
Query 2828 CCCGGGCTTCAGC 2840
||| |||||||||
Sbjct 50803 CCCAGGCTTCAGC 50791
>seq93
Length=4375509
Score = 118 bits (130), Expect = 3e-23
Identities = 70/73 (96%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
|||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct 3379601 GGCTGAAGTAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAG 3379660
Query 2828 CCCGGGCTTCAGC 2840
|||||||||||||
Sbjct 3379661 CCCGGGCTTCAGC 3379673
Score = 118 bits (130), Expect = 3e-23
Identities = 70/73 (96%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
|||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct 3392230 GGCTGAAGTAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAG 3392171
Query 2828 CCCGGGCTTCAGC 2840
|||||||||||||
Sbjct 3392170 CCCGGGCTTCAGC 3392158
>seq142
Length=2100711
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 1047579 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 1047520
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 1047519 CCGGGTTTCGGC 1047508
>seq58
Length=6922550
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 89142 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 89083
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 89082 CCGGGTTTCGGC 89071
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15849402028590
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |