Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aquila_20chrysaetos_20canadensis_20[refseq_20GCF_5F000766835.1_20201
4-10-14] 1,142 sequences; 1,192,743,076 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq36 102 8e-17
seq80 91.5 1e-13
seq49 84.2 2e-11
>seq36
Length=10026654
Score = 102 bits (112), Expect = 8e-17
Identities = 145/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 134514 AGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTG 134573
|| ||||||||||| || |||||||||||| | |||| || || || ||||| |||
Sbjct 5148313 AGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCATCTTCCAGCTGCTTG 5148254
Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633
|| ||||| |||| | ||||||||| || || |||||||| || || || || ||
Sbjct 5148253 CCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCC 5148194
Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693
||||| || | ||||| | ||| || || || || ||||| || || || |
Sbjct 5148193 TTGACATTCTCAATGGTGTCACTGGGTTCAACCTCAAGGGTGATGGTCTTGCCAGTCAGG 5148134
Query 134694 GTTTTAACGAAAATTTGCATTTTG 134717
|| || || || || |||||||||
Sbjct 5148133 GTCTTCACAAAGATCTGCATTTTG 5148110
Score = 82.4 bits (90), Expect = 8e-11
Identities = 86/113 (76%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || || || |||| ||| || || || ||||||||||| || ||||||||||||
Sbjct 5149434 CCACCCCTCAGGCGCAGCACAAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAC 5149375
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATC 134599
| |||| || || || ||||| ||||| ||||| |||| | |||||||||
Sbjct 5149374 AGGGTGCGACCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATC 5149322
>seq80
Length=5371318
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 134499 CGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAG 134558
|||| ||| || || || ||||||||||| || ||||||||||| | |||| |
Sbjct 4804760 CGCAGCACAAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCA 4804819
Query 134559 TCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTT 134618
|| || ||||| ||||| ||||| |||| | ||||||||| || || |||||||| ||
Sbjct 4804820 TCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTG 4804879
Query 134619 TCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATG 134678
|| || || || ||||| || | ||||| | || || || || || |||
Sbjct 4804880 TCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACTTCCAGGGTTATG 4804939
Query 134679 GTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || || | || || || || || |||||
Sbjct 4804940 GTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 4804974
>seq49
Length=8140862
Score = 84.2 bits (92), Expect = 2e-11
Identities = 97/131 (74%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 8233 GCCATTATCGAATGTCAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTGC 8292
|| || || |||| ||| | || || || | ||||||||||||||||||||| |||||
Sbjct 7588509 GCTATCATTGAATCTCAGACAGAGACTGGCACACCGTACATGCTGTACAAAGACTCTTGC 7588568
Query 8293 AACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGAA 8352
||| || |||||||| ||| | || ||||| |||||||||||||| | |||
Sbjct 7588569 AACCGGAAGAGCAATCAGCAGAACTTAGGGACCATCAAATGCAGCAATCTGTGTACAGAA 7588628
Query 8353 ATTGTACAGTA 8363
|| || ||||
Sbjct 7588629 ATAGTGGAGTA 7588639
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505391185437840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |