Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aquila_20chrysaetos_20canadensis_20[refseq_20GCF_5F000766835.1_20201
4-10-14] 1,142 sequences; 1,192,743,076 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq20 114 1e-20
seq39 95.1 1e-14
>seq20
Length=13035929
Score = 114 bits (126), Expect = 1e-20
Identities = 90/108 (83%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 43913 CAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAAT 43972
|||||||| ||| | ||||||| || ||||| ||||| || || |||||||| ||||||
Sbjct 5724996 CAAGAAGTACAAATCACAGAAGCTCGCTGTTTCTATGGCTTCCAGATTGCCATGGAAAAT 5724937
Query 43973 ATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGAT 44020
|| ||||| ||||||||||||||||| || || || ||||| ||||||
Sbjct 5724936 ATACATTCAGAAATGTACAGTCTTCTTATTGACACCTACATTAAAGAT 5724889
>seq39
Length=9497852
Score = 95.1 bits (104), Expect = 1e-14
Identities = 115/157 (73%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 41047 TGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCAATGGTGAACTGT 41106
||||||| |||| || || ||| | || ||||| || ||| || |||||| |||
Sbjct 340173 TGATGGCTCTGCCTCCATGCCATGCCCTTTGCCAGTTCTATGTTCTAAACGGTGAATTGT 340114
Query 41107 CATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAGCGA 41166
| || ||| | ||||| || || || || ||||||||||| || || || || || || |
Sbjct 340113 CTTGCCAACTCTATCAGAGGTCTGGAGATATGGGACTAGGAGTGCCTTTCAATATTGCCA 340054
Query 41167 GTTATGCTCTGCTCACGTATATGATTGCACACGTTAC 41203
| ||| | |||||||| || |||||||| || || ||
Sbjct 340053 GCTATTCACTGCTCACTTACATGATTGCCCATGTCAC 340017
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397450468157710
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |