Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aquila_20chrysaetos_20canadensis_20[refseq_20GCF_5F000766835.1_20201 4-10-14] 1,142 sequences; 1,192,743,076 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq73 208 2e-48 seq92 161 3e-34 seq80 152 2e-31 seq36 132 1e-25 seq28 98.7 3e-15 seq5 89.7 2e-12 seq20 84.2 7e-11 >seq73 Length=5915304 Score = 208 bits (230), Expect = 2e-48 Identities = 380/549 (69%), Gaps = 8/549 (1%) Strand=Plus/Plus Query 349760 GaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACA 349819 |||| ||| ||||||| || || | || ||||| || |||||||| ||| | || || Sbjct 3897952 GAAAGGAATGTTCTTATCTTCGACCTTGGAGGTGGCACCTTTGATGTGTCAATTCTGACC 3898011 Query 349820 CTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAA 349879 ||||||| || || ||||| || ||| | ||||| ||||| || || | ||||||||| Sbjct 3898012 ATTGAAGATGGCATCTTTGAGGTGAAATCCACTGCAGGTGACACTCACTTGGGTGGAGAA 3898071 Query 349880 GATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGC-TAAAAT 349938 || ||||| || || | || || || || ||||| ||||| ||||| || | Sbjct 3898072 GACTTTGACAACCGCATGGTCAACCACTTCATTGCTGAATTCAAGCG-CAAGCACAAGAA 3898130 Query 349939 TGATATTGGAGATAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAA 349998 || || | || || |||||| | |||||||| | ||||| || || ||||| || Sbjct 3898131 AGACATCAGCGAGAACAAGAGAGCAGTTCGTCGCCTCCGCACTGCTTGCGAGCGTGCAAA 3898190 Query 349999 GCGTTCCTTATCATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAA 350058 |||| | | || |||| || || || ||| |||||||||||||| ||| || | Sbjct 3898191 GCGTACTCTGTCTTCTAGCACGCAGGCCAGTATCGAAATTGATTCTCTCTATGAGGGTAT 3898250 Query 350059 AGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAGAATTATGTATG--GATCTTTTT 350116 || |||| |||| ||||| | ||||| |||||||| || ||| || || || Sbjct 3898251 TGACTTCTACACATCCATTACCAGAGCTCGCTTTGAAGA--GCTGAATGCTGACCTGTTC 3898308 Query 350117 AGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAG 350176 | | || |||||||||||||||| | | ||||| ||| | |||| ||| Sbjct 3898309 CGTGGCACTCTGGATCCTGTGGAAAAGGCCCTGCGGGATGCCAAACTCGACAAATCGCAG 3898368 Query 350177 ATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTA 350236 || |||| | || | |||||||| ||||| ||||| ||||| |||| | | || Sbjct 3898369 ATCCATGACATCGTGCTGGTTGGTGGGTCTACTCGTATCCCAAAGATTCAGAAACTGCTG 3898428 Query 350237 TCTGAGTTTTTTAATGGCAAAGAAC-CTTCTAGATCAATTAATCCAGATGAAGCTGTTGC 350295 || || || ||||||||||| | | ||| | || ||||| ||||||||||| || Sbjct 3898429 CAGGACTTCTTCAATGGCAAAGAGCTGAACAAGAGC-ATCAATCCTGATGAAGCTGTGGC 3898487 Query 350296 ATATGGTGC 350304 |||||||| Sbjct 3898488 CTATGGTGC 3898496 Score = 122 bits (134), Expect = 3e-22 Identities = 141/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 ||| | ||||| ||| | || || || ||||| ||||||| ||| | ||| ||| Sbjct 3896674 GCTGTCGGAATTGATCTTGGCACCACCTATTCCTGTGTTGGTGTATTCCAACATGGGAAG 3896733 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || ||||| ||||| ||||| || |||||| | || |||||| |||||||| || || Sbjct 3896734 GTGGAAATCATTGCCAATGACCAGGGTAACCGGACCACGCCAAGCTACGTTGCCTTCACA 3896793 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || || ||| | ||||||| ||| ||||||| || |||| ||| ||||||| ||| Sbjct 3896794 GATACGGAGAGGTTGATTGGCGATGCTGCAAAGAACCAAGTTGCAATGAATCCAACCAAT 3896853 Query 349379 ACGGTTTTTG 349388 |||||||||| Sbjct 3896854 ACGGTTTTTG 3896863 Score = 120 bits (132), Expect = 9e-22 Identities = 343/522 (66%), Gaps = 4/522 (1%) Strand=Plus/Minus Query 183262 CTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGAGATAAT-TCTTTGCCATTA 183320 |||||||||| || ||||||||||| || || || | | | | | ||||||||||| Sbjct 3898498 CTGCACCATAGGCCACAGCTTCATCAGGATTGAT-GCTCTTGTTCAGCTCTTTGCCATTG 3898440 Query 183321 AAAAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGAACCACCGACTAATACT 183380 || || || |||| || ||||| ||||| || | ||| || ||||| || | || Sbjct 3898439 AAGAAGTCCTGCAGCAGTTTCTGAATCTTTGGGATACGAGTAGACCCACCAACCAGCACG 3898380 Query 183381 ACTTCATCGATATTACTTTTA-CTAATTTGTGAATCTTTTAAAACTTTTTCAACAGGGTC 183439 | |||| ||| | ||| | | |||| | ||| | | ||||| ||||| || Sbjct 3898379 ATGTCATGGATCTGCGATTTGTCGAGTTTG-GCATCCCGCAGGGCCTTTTCCACAGGATC 3898321 Query 183440 CATAGTTTTTCTAAATAAATCTATACATAACTCTTCTAATCTTGCTCTAGTTAAAGATGa 183499 || ||| | || | || | | |||||| || | ||||| || | |||| Sbjct 3898320 CAGAGTGCCACGGAACAGGTCAGCATTCAGCTCTTCAAAGCGAGCTCTGGTAATGGATGT 3898261 Query 183500 aaaaaaGTCAATACCATTATATAAGGAATCAATTTCAATCGATGTTTGTGTAGATGATGA 183559 | ||||||||||| | ||| | ||||||||||| || | || || || || Sbjct 3898260 GTAGAAGTCAATACCCTCATAGAGAGAATCAATTTCGATACTGGCCTGCGTGCTAGAAGA 3898201 Query 183560 TAATGTTCTTTTAGCTCGTTCACATGCTGTTCTTAGTCGACGTAATGATCTTGGATTATC 183619 | || | || || || || || || || | || ||||| | || ||| || || Sbjct 3898200 CAGAGTACGCTTTGCACGCTCGCAAGCAGTGCGGAGGCGACGAACTGCTCTCTTGTTCTC 3898141 Query 183620 TGTAATATCTTGTTTATGTTTTCTTTTAAATTCAGTAATAAAATGTTGAAGTAATCTTGT 183679 | || |||| || || || | || ||||||| ||| || || | | | | | Sbjct 3898140 GCTGATGTCTTTCTTGTGCTTGCGCTTGAATTCAGCAATGAAGTGGTTGACCATGCGGTT 3898081 Query 183680 ATCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTCC 183739 ||||| ||||| ||||| || || || || || ||||| | ||| || ||||| || || Sbjct 3898080 GTCAAAGTCTTCTCCACCCAAGTGAGTGTCACCTGCAGTGGATTTCACCTCAAAGATGCC 3898021 Query 183740 GTCTTCAATATTTAAAATTGATACATCAAATGTACCACCACC 183781 |||||||| | | |||||| |||||||| || ||||| || Sbjct 3898020 ATCTTCAATGGTCAGAATTGACACATCAAAGGTGCCACCTCC 3897979 Score = 114 bits (126), Expect = 4e-20 Identities = 116/151 (77%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 349598 ACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCA 349657 || || ||| ||||||| | ||||||||||||||||| ||||| | |||||| || Sbjct 3897690 ACTGTTACTAATGCTGTGGTGACTGTACCAGCCTATTTCAATGACTCTCAGCGTCAGGCT 3897749 Query 349658 ACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACT 349717 |||||||| ||||| | |||||| ||| | ||||| || |||| || ||||| || || Sbjct 3897750 ACAAAAGACGCTGGAACCATTGCAGGGCTCAATGTACTGCGAATTATCAATGAGCCGACA 3897809 Query 349718 GCTGCAGCAATTGCATATGGGCTTGATAAAA 349748 ||||| || || || ||||| || || |||| Sbjct 3897810 GCTGCTGCGATAGCCTATGGTCTGGACAAAA 3897840 Score = 87.8 bits (96), Expect = 5e-12 Identities = 115/156 (74%), Gaps = 5/156 (3%) Strand=Plus/Plus Query 349433 CAATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATT 349492 || |||||| | || || | ||||| ||||| || || || | || || ||||| Sbjct 3897427 CAGTCTGATATGAAGCACTGGCCTTTCACTGTGGTG---AATGATGCTGGTAGACCAAAA 3897483 Query 349493 ATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCC-GAAGAAATTTCATCAAT 349551 | |||| || || ||||| || | ||| | ||| ||||| ||||||||||| || || Sbjct 3897484 GTCCAGGTGGAGTACAAAGGCGAG-ACAAAGAGTTTCTACCCAGAAGAAATTTCTTCCAT 3897542 Query 349552 GGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATA 349587 ||||||| ||||||||||||||||| ||||| || Sbjct 3897543 GGTTTTAACCAAAATGAAGGAAATTGCAGAAGCTTA 3897578 >seq92 Length=4479760 Score = 161 bits (178), Expect = 3e-34 Identities = 500/769 (65%), Gaps = 10/769 (1%) Strand=Plus/Minus Query 349562 AAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACT 349621 || |||||||| || ||||| || ||| | || | || ||||||| || || Sbjct 2068679 AAGATGAAGGAGATCGCTGAGGCCTATCTGGGGCGCAAGGTGCAGAATGCTGTCATCACA 2068620 Query 349622 GTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCG 349681 || || ||||| || || || ||||||| || || ||||| ||||||| ||| | Sbjct 2068619 GTGCCTGCCTACTTCAACGACTCCCAGCGCCAGGCCACCAAAGACGCTGGCACCATCACT 2068560 Query 349682 GGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTT 349741 || | ||||| | | || || || || ||||| || || || || || ||||| | Sbjct 2068559 GGCCTTAATGTGATGCGCATTATCAACGAGCCCACAGCAGCTGCTATAGCCTATGGCTTG 2068500 Query 349742 GATAAAATGAGTGACCA------AGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGT 349795 || || | || || ||| || || | || || ||||| || || || || Sbjct 2068499 GACAAGAAAGGTACCCGGGCTGGAGAGAAGAACGTGCTCATCTTTGACTTGGGAGGGGGC 2068440 Query 349796 ACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCT 349855 |||||||||||||| | || || |||| || || || ||||| || || | || ||| Sbjct 2068439 ACTTTTGATGTATCCATCCTTACCATTGAGGATGGCATCTTTGAGGTGAAGTCCACAGCT 2068380 Query 349856 GGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAA 349915 ||||| || || || ||||| || || ||||| || || | || ||||||||| || Sbjct 2068379 GGTGACACCCACCTGGGTGGGGAGGACTTTGACAACCGCATGGTGAACCATTTTGTTGAA 2068320 Query 349916 GAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCT 349974 ||||| |||||| |||| || || |||| | || |||| || | || || Sbjct 2068319 GAATTCAAGCGT-AAGCACAAGCGCGACATTGCTGGCAACAAGCGAGCGGTGAGGCGACT 2068261 Query 349975 AAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGA 350034 | || || ||||| | || ||||| || | ||| | || ||| | ||||| Sbjct 2068260 GCGTACAGCTTGTGAGAGGGCGAAGCGCACCCTCAGCTCTTCCACGCAAGCTAGCATTGA 2068201 Query 350035 AATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGA 350094 || || || || || |||| || |||| | || ||||| ||||| || || || Sbjct 2068200 GATCGACTCCCTCTACGAGGGCATTGACTTCTACACCTCCATTACTCGTGCCCGCTTCGA 2068141 Query 350095 AGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGA 350154 || | | ||||| || | | || |||| || ||||| || | | || Sbjct 2068140 GGAGCTCAATGCCGATCTCTTCCGTGGCACCCTGGAGCCAGTGGAGAAGGCTCTGCGCGA 2068081 Query 350155 TGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTAT 350214 ||| || | ||| ||||| | || | || | || ||||| || || ||||| Sbjct 2068080 TGCCAAGCTAGACAAGGGCCAGATCCAGGAGATCGTGCTGGTGGGTGGCTCCACTCGTAT 2068021 Query 350215 TCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAAC-CTTCTAGATCAA 350273 || || | ||| || | ||| || || || ||||||||||| | | | ||| | | Sbjct 2068020 CCCCAAGATCCAAAAGCTGCTACAGGACTTCTTCAATGGCAAAGAGCTCAACAAGAGC-A 2067962 Query 350274 TTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTAT 350322 | || || ||||| |||||||| ||||| |||||||| || || |||| Sbjct 2067961 TCAACCCCGATGAGGCTGTTGCTTATGGCGCTGCTGTGCAAGCGGCTAT 2067913 >seq80 Length=5371318 Score = 152 bits (168), Expect = 2e-31 Identities = 171/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 140509 TACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAG 140568 ||||||| | || | || |||||||| || || || || || || || || || |||| Sbjct 4804746 TACCACCCCTCAAGCGCAGCACAAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAG 4804805 Query 140569 ATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAG 140628 | | || ||||||||||| || || || ||||||||||| || | ||||||||||| | Sbjct 4804806 ACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGG 4804865 Query 140629 GAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAA 140688 |||| ||||| || ||||| || || || || ||||| ||||| | ||| || |||| Sbjct 4804866 GAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAA 4804925 Query 140689 CTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||| || || | ||||| || || || || || ||||| |||||||| Sbjct 4804926 CTTCCAGGGTTATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 4804974 >seq36 Length=10026654 Score = 132 bits (146), Expect = 1e-25 Identities = 150/201 (75%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 140538 AGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTT 140597 || || || || || || || || || || || | || || |||||||| || || || Sbjct 5148313 AGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCATCTTCCAGCTGCTTG 5148254 Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657 ||||||||||| || | ||||||||||| ||||| ||||| || ||||| || || || Sbjct 5148253 CCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCC 5148194 Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717 || ||||| ||||| | ||| |||||||| ||||| || | ||||| || || || Sbjct 5148193 TTGACATTCTCAATGGTGTCACTGGGTTCAACCTCAAGGGTGATGGTCTTGCCAGTCAGG 5148134 Query 140718 GTTTTTACAAAAATCTGCATT 140738 || || ||||| ||||||||| Sbjct 5148133 GTCTTCACAAAGATCTGCATT 5148113 >seq28 Length=10738426 Score = 98.7 bits (108), Expect = 3e-15 Identities = 126/173 (73%), Gaps = 3/173 (2%) Strand=Plus/Plus Query 349715 ACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTT 349774 || ||||| || ||||| ||||| | || || ||| || || || || || ||| Sbjct 48806 ACGGCTGCTGCCATTGCTTATGGATTGGACAA---GAGAGAGGGTGAGAAGAACATCCTT 48862 Query 349775 ATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATT 349834 | ||||| || |||||||| ||||||||||| || || || ||| |||| | ||| | Sbjct 48863 GTGTTTGACTTGGGTGGTGGAACTTTTGATGTCTCCCTCCTCACAATTGACAATGGAGTC 48922 Query 349835 TTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGA 349887 || |||||| || ||| |||||| || || || ||||||||||| ||||| Sbjct 48923 TTCGAAGTTGTGGCTACTAATGGTGACACTCACCTGGGTGGAGAAGACTTTGA 48975 Score = 95.1 bits (104), Expect = 4e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 350177 ATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTA 350236 |||||||| | ||| | |||||||| ||||| || || || ||| | || || || | Sbjct 49580 ATTGATGAGATTGTTCTTGTTGGTGGCTCTACTCGCATCCCCAAAATACAGCAACTAGTT 49639 Query 350237 TCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAATTAATCCAGATGAAGCTGTTGCA 350296 ||||| || ||||| ||||| || ||| | |||||||||||||| ||||| || Sbjct 49640 AAAGAGTTCTTCAATGGGAAAGAGCCATCTCGTGGCATTAATCCAGATGAGGCTGTAGCC 49699 Query 350297 TATGGTGCTGCTGTTCAGGC 350316 |||||||| ||||| ||||| Sbjct 49700 TATGGTGCGGCTGTCCAGGC 49719 Score = 93.3 bits (102), Expect = 1e-13 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 349608 ATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATG 349667 |||||||| ||||||| |||||||| || |||||||| |||||| || || ||||||| Sbjct 48617 ATGCTGTTGTTACTGTGCCAGCCTACTTCAATGATGCTCAGCGTCAGGCTACGAAAGATG 48676 Query 349668 CTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACC 349713 |||| | ||||| ||||| ||||| | |||| || ||||| || Sbjct 48677 CTGGTACTATTGCTGGGTTGAATGTGATGCGAATCATCAATGAGCC 48722 >seq5 Length=22535033 Score = 89.7 bits (98), Expect = 2e-12 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 140548 CTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGA 140607 ||||||||||||| || ||||| | ||| || |||||||| || || || |||||||| | Sbjct 17931471 CTTTTTGAATATTGTAGTCAGACAGTGTGCGTCCATCTTCTAGCTGCTTACCAGCAAAAA 17931530 Query 140608 TTAGACGTTGCTGATCAGGAGGAATTCCT 140636 | || || |||||||| |||||||| ||| Sbjct 17931531 TCAGTCGCTGCTGATCTGGAGGAATGCCT 17931559 >seq20 Length=13035929 Score = 84.2 bits (92), Expect = 7e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 223719 ATGCCTCATCTCTTGATATTAATTCATTTGAAAATGTTAATCCAGGCATTAAACCTCTCT 223778 || |||||||||| || | |||||| ||||| || | |||||||||||| || || | Sbjct 5722759 ATACCTCATCTCTACTGATGAGTTCATTAGAAAAAGTGAGTCCAGGCATTAATCCCCTTT 5722818 Query 223779 TTTTCATCCAAAATATTGCGCAAAAAGCTCCTGaaaaaaaTATACCTTCTACACAAGCAA 223838 | |||| |||||| |||| ||||| || ||||| || || ||||| || |||| Sbjct 5722819 TCTTCAGCCAAAAAATTGATGCAAAAGAGCCAGAAAAGAAGATTCCTTCCACTGCTGCAA 5722878 Query 223839 ACGCTACTA 223847 | ||||||| Sbjct 5722879 AAGCTACTA 5722887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515232228987026