Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aquila_20chrysaetos_20canadensis_20[refseq_20GCF_5F000766835.1_20201 4-10-14] 1,142 sequences; 1,192,743,076 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq4 264 1e-65 seq34 158 2e-33 >seq4 Length=24539817 Score = 264 bits (292), Expect = 1e-65 Identities = 639/954 (67%), Gaps = 20/954 (2%) Strand=Plus/Minus Query 13600 CGCCGGGAGACTACGTGAACATGACGGCCGACTGCGTGGCCTTCGTGAAAGACAGGGGGT 13659 |||| || || ||| ||||||||||| |||||| |||| | | ||| || | Sbjct 5980230 CGCCCGGCGAGTACCTGAACATGACGAAGGACTGCAGCAACTTCAAGGA-GACCCGGCGA 5980172 Query 13660 ATC-TCGTGAGGCCCCTGAGCCTGGAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTG 13718 || ||| | || ||||||| ||| |||| ||||| |||||||||||||| || || Sbjct 5980171 TTCATCGAGTTCCCGCTGAGCCAGGAGGAGGCGGAGTTCCCCATCGCCTACTCCATGGTC 5980112 Query 13719 ATCCACCACAAGATCGAGATGTTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAAC 13778 |||||| |||| ||||||||||| ||||| |||||| | || |||||||||| |||||| Sbjct 5980111 ATCCACAACAAAATCGAGATGTTTGAGCGGCTCCTGCGCTCCCTCTACGCCCCCCAGAAC 5980052 Query 13779 CTCTACTGCGTCCACGTGGACTCCAAG--TCCGGCGACGAGTTCATCCGGGGCGTCTCGG 13836 |||||||||||||||| ||| |||| |||||| || ||| || ||| || Sbjct 5980051 GTCTACTGCGTCCACGTCGACAGCAAGTCTCCGGC--CGCCTTCCAGGAGGCCGTGCGGG 5979994 Query 13837 CCATCGCCAGGTGCTTCCCTAACGTGGCCCTGGCCCACCGGCTGCACGACGTGGTGTACG 13896 |||||| |||||||| ||||| |||| ||| || | || |||||||||| Sbjct 5979993 CCATCGTGGCCTGCTTCCCCAACGTCTTTGTGGCGAGCCGCTTGGAAGAGGTGGTGTACG 5979934 Query 13897 GCTCCTGGAGTCGCGTGCAGGCCGACCTCAGCTGCATGTCGGACCTGGACGCCTCCCCCG 13956 ||||||| || ||||||| ||||||| ||||||| ||||||| |||| Sbjct 5979933 CCTCCTGGTCCCGGCTGCAGGCTGACCTCAACTGCATGCAGGACCTGCTGCAGAGCCCCA 5979874 Query 13957 TCAAGTGGAGGTACCTGCTCAACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGG 14016 | |||| | ||| | |||||| ||||| | || ||||| ||||||||||| | | Sbjct 5979873 TGCCGTGGCGCTACGTCCTCAACACCTGCGGCACCGATTTCCCCATCAAGACCAACGTCG 5979814 Query 14017 AGATCGTGCGGGCGCTGAAGGCCCTGGGCGGCAAGAACGCCCTGGAG--AGCGAGGGCAT 14074 ||||||| || || ||||||| ||| || |||| | ||||| || || ||| | Sbjct 5979813 AGATCGTCCGTGCCCTGAAGGTGCTGCAGGGGCGGAACAGCATGGAGTCAGAGAAGGCCT 5979754 Query 14075 GCCCAACCACAAGCTGCACCGC-ATCAGGAAGAGGCACGTGGTGGCCAGCGGCGGCGTGG 14133 | || ||||| | ||| ||| | | ||| |||| || | | Sbjct 5979753 --CGGGCCCCAAGCGGGCGCGCTGGCAGTACCA-CCACCAAGTGG-----GGAAG-TTCA 5979703 Query 14134 TGGTCAACACCGGCAGGAACAAGGCCCCGCCGCCGCTCAGGATCCCCATCTTTGCGGGAA 14193 | || || | || | || | ||||| || | || ||||| || |||| | Sbjct 5979702 TCTTCCGGACAGCCACAGAGAAACCTCCGCCACCCCACAACTATCCCATGTTCACGGGCA 5979643 Query 14194 ACGCTTACTTTGCGGTCACCCGGGAGTTCGTGGACTTCGTCCTCAAGGACGAGCCGGTGG 14253 |||| ||| ||| |||||| |||| |||||| | | | || | || || ||| | Sbjct 5979642 ACGCGTACATTGTGGTCACGCGGGCCTTCGTGCAGTACATCTTTGAGAACCCCACGGCGC 5979583 Query 14254 CCCTGCTCATGCACTGGTTCGAGGACACGTACAGCCCCGACGAGCACCTGTGGGCCACCG 14313 | | || | | ||| | ||||||| |||||||| ||||| ||| | ||||||||| Sbjct 5979582 AGCAGTTCCTCGAGTGGGCCAAGGACACCTACAGCCCTGACGAACACGTCTGGGCCACCC 5979523 Query 14314 TGCAGAGAATGTACGGGACGCCCGGGGGGATCCCCGTTCACGTCAAGTACGACACCTCGG 14373 | | | ||| ||| ||| || | | ||| | | ||||| | | ||||| Sbjct 5979522 TCAACCGCATGCCCGGCGTGCCGGGCGCCACGCCCCAGAATGACAAGTTCCAGCTCTCGG 5979463 Query 14374 ACATGTGGGCCAAGGTCAGGTTCGTCAAGTGGCACTACTACGAGGGGGATATCAAGAAAG 14433 ||||| ||| | | | | ||||||||||| ||| ||||| || | || || | Sbjct 5979462 ACATGAACGCCCTGCCCCGCCTGGTCAAGTGGCAGTACCTGGAGGGCGACACCAGCAAGG 5979403 Query 14434 GGGCCCTGTACCCGCCTTGCGACGGCATCCACGTCCACGCCATCTGCATCTTCGGGTCCG 14493 | || | |||||||| ||| |||| ||| | | || |||| |||| |||| | | Sbjct 5979402 GCGCGCCCTACCCGCCCTGCACCGGCCAGCACCAGCGCTCCGTCTGTATCTACGGGGCGG 5979343 Query 14494 GCGACGTGAAGTGGCTG-AAGAGCGTCCCGCACCTGTTCGCCAACAAGTTCGAC 14546 |||||||| ||| || ||| | | ||||| || ||||||||||||||| Sbjct 5979342 GCGACGTGCCCTGGTTGCTCCAGCAGCAC-CACCTCTTGGCCAACAAGTTCGAC 5979290 >seq34 Length=10022417 Score = 158 bits (174), Expect = 2e-33 Identities = 267/379 (70%), Gaps = 12/379 (3%) Strand=Plus/Minus Query 13683 GAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAGA---TCGAGATG 13739 || |||| || || |||||||||||| || ||| || |||||| |||||| Sbjct 5254268 GAGGAGGCCGCCTTCCCCATCGCCTACG---TCATGACCCTGCACAAGGAGTTCGAGACC 5254212 Query 13740 TTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGTGGAC 13799 |||||||| ||| | |||| | ||| || || ||| |||||||||||||||||||| Sbjct 5254211 TTCGAGCGGCTCTTCCGGGCGGTGTACATGCCCCAAAACGTCTACTGCGTCCACGTGGAC 5254152 Query 13800 TCCAAGTC--CGGCGACGAGTTCATCCGGGGCGTCTCGGC-CATCGCCAGGTGCTTCCCT 13856 ||||| | |||| | | || | || | ||| |||| | | | | |||||||| Sbjct 5254151 GCCAAGGCGCCGGCCCCCT-TCCAGCAGGCG-GTC-CGGCGCCTGGTGGGCTGCTTCCCC 5254095 Query 13857 AACGTGGCCCTGGCCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTCGCGTGCAG 13916 || | ||| ||| |||| | | ||||| |||||| | | ||| ||| | Sbjct 5254094 AATGCCTTCCTCGCCTCCCGGGCGGAGCGGGTGGTCTACGGCGGCGCGTCCCGCCTGCGG 5254035 Query 13917 GCCGACCTCAGCTGCATGTCGGACCTGGACGCCTCCCCCGTCAAGTGGAGGTACCTGCTC 13976 ||||||||| |||||||| |||||| ||||| |||| ||| | ||||||||| Sbjct 5254034 GCCGACCTCCGCTGCATGGGAGACCTGCTGGCCTCGGCCGTGCCCTGGCGCTACCTGCTC 5253975 Query 13977 AACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGGGCGCTGAAG 14036 ||| ||||| ||||||||| | |||||||||| ||||||||| ||| ||||||| Sbjct 5253974 AACACCTGCGGCCAGGACTTCCCCTTGAAGACCAACCGGGAGATCGTCCGGCTGCTGAAG 5253915 Query 14037 GCCCTGGGCGGCAAGAACG 14055 | ||| || || ||||||| Sbjct 5253914 GGCCTCGGGGGGAAGAACG 5253896 Score = 87.8 bits (96), Expect = 2e-12 Identities = 116/158 (73%), Gaps = 6/158 (4%) Strand=Plus/Minus Query 14153 CAAGGCCCCGCCGCCGCTCAGGATCCCCATCTTTGCGGGAAACGCTTACTTTGCGGTCAC 14212 |||||| || ||||||| || ||| || ||| || ||| ||| | || ||||| Sbjct 5253789 CAAGGCGCCCCCGCCGCACAACATCACCCTCTACTTCGGCTCCGCGTACGTGGCCGTCAC 5253730 Query 14213 CCGGGAGTTCGTGGACTTCGTCCTCAAGGACGAGC---CGGTGGCCCTGCTCATGCACTG 14269 |||| |||||||| ||||| || |||| ||| | || | |||||| || ||| Sbjct 5253729 CCGGCCCTTCGTGGAGTTCGTGCTGCGGGACCAGCGTGCCGTCGACCTGCTG--GC-CTG 5253673 Query 14270 GTTCGAGGACACGTACAGCCCCGACGAGCACCTGTGGG 14307 || ||||||||| |||||||||||||||||| | |||| Sbjct 5253672 GTCCGAGGACACCTACAGCCCCGACGAGCACTTCTGGG 5253635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658729796497920