Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aquila_20chrysaetos_20canadensis_20[refseq_20GCF_5F000766835.1_20201
4-10-14] 1,142 sequences; 1,192,743,076 total letters
Query= NC_028379.1
Length=205896
Score E
Sequences producing significant alignments: (Bits) Value
seq4 264 1e-65
seq34 158 2e-33
>seq4
Length=24539817
Score = 264 bits (292), Expect = 1e-65
Identities = 639/954 (67%), Gaps = 20/954 (2%)
Strand=Plus/Minus
Query 13600 CGCCGGGAGACTACGTGAACATGACGGCCGACTGCGTGGCCTTCGTGAAAGACAGGGGGT 13659
|||| || || ||| ||||||||||| |||||| |||| | | ||| || |
Sbjct 5980230 CGCCCGGCGAGTACCTGAACATGACGAAGGACTGCAGCAACTTCAAGGA-GACCCGGCGA 5980172
Query 13660 ATC-TCGTGAGGCCCCTGAGCCTGGAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTG 13718
|| ||| | || ||||||| ||| |||| ||||| |||||||||||||| || ||
Sbjct 5980171 TTCATCGAGTTCCCGCTGAGCCAGGAGGAGGCGGAGTTCCCCATCGCCTACTCCATGGTC 5980112
Query 13719 ATCCACCACAAGATCGAGATGTTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAAC 13778
|||||| |||| ||||||||||| ||||| |||||| | || |||||||||| ||||||
Sbjct 5980111 ATCCACAACAAAATCGAGATGTTTGAGCGGCTCCTGCGCTCCCTCTACGCCCCCCAGAAC 5980052
Query 13779 CTCTACTGCGTCCACGTGGACTCCAAG--TCCGGCGACGAGTTCATCCGGGGCGTCTCGG 13836
|||||||||||||||| ||| |||| |||||| || ||| || ||| ||
Sbjct 5980051 GTCTACTGCGTCCACGTCGACAGCAAGTCTCCGGC--CGCCTTCCAGGAGGCCGTGCGGG 5979994
Query 13837 CCATCGCCAGGTGCTTCCCTAACGTGGCCCTGGCCCACCGGCTGCACGACGTGGTGTACG 13896
|||||| |||||||| ||||| |||| ||| || | || ||||||||||
Sbjct 5979993 CCATCGTGGCCTGCTTCCCCAACGTCTTTGTGGCGAGCCGCTTGGAAGAGGTGGTGTACG 5979934
Query 13897 GCTCCTGGAGTCGCGTGCAGGCCGACCTCAGCTGCATGTCGGACCTGGACGCCTCCCCCG 13956
||||||| || ||||||| ||||||| ||||||| ||||||| ||||
Sbjct 5979933 CCTCCTGGTCCCGGCTGCAGGCTGACCTCAACTGCATGCAGGACCTGCTGCAGAGCCCCA 5979874
Query 13957 TCAAGTGGAGGTACCTGCTCAACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGG 14016
| |||| | ||| | |||||| ||||| | || ||||| ||||||||||| | |
Sbjct 5979873 TGCCGTGGCGCTACGTCCTCAACACCTGCGGCACCGATTTCCCCATCAAGACCAACGTCG 5979814
Query 14017 AGATCGTGCGGGCGCTGAAGGCCCTGGGCGGCAAGAACGCCCTGGAG--AGCGAGGGCAT 14074
||||||| || || ||||||| ||| || |||| | ||||| || || ||| |
Sbjct 5979813 AGATCGTCCGTGCCCTGAAGGTGCTGCAGGGGCGGAACAGCATGGAGTCAGAGAAGGCCT 5979754
Query 14075 GCCCAACCACAAGCTGCACCGC-ATCAGGAAGAGGCACGTGGTGGCCAGCGGCGGCGTGG 14133
| || ||||| | ||| ||| | | ||| |||| || | |
Sbjct 5979753 --CGGGCCCCAAGCGGGCGCGCTGGCAGTACCA-CCACCAAGTGG-----GGAAG-TTCA 5979703
Query 14134 TGGTCAACACCGGCAGGAACAAGGCCCCGCCGCCGCTCAGGATCCCCATCTTTGCGGGAA 14193
| || || | || | || | ||||| || | || ||||| || |||| |
Sbjct 5979702 TCTTCCGGACAGCCACAGAGAAACCTCCGCCACCCCACAACTATCCCATGTTCACGGGCA 5979643
Query 14194 ACGCTTACTTTGCGGTCACCCGGGAGTTCGTGGACTTCGTCCTCAAGGACGAGCCGGTGG 14253
|||| ||| ||| |||||| |||| |||||| | | | || | || || ||| |
Sbjct 5979642 ACGCGTACATTGTGGTCACGCGGGCCTTCGTGCAGTACATCTTTGAGAACCCCACGGCGC 5979583
Query 14254 CCCTGCTCATGCACTGGTTCGAGGACACGTACAGCCCCGACGAGCACCTGTGGGCCACCG 14313
| | || | | ||| | ||||||| |||||||| ||||| ||| | |||||||||
Sbjct 5979582 AGCAGTTCCTCGAGTGGGCCAAGGACACCTACAGCCCTGACGAACACGTCTGGGCCACCC 5979523
Query 14314 TGCAGAGAATGTACGGGACGCCCGGGGGGATCCCCGTTCACGTCAAGTACGACACCTCGG 14373
| | | ||| ||| ||| || | | ||| | | ||||| | | |||||
Sbjct 5979522 TCAACCGCATGCCCGGCGTGCCGGGCGCCACGCCCCAGAATGACAAGTTCCAGCTCTCGG 5979463
Query 14374 ACATGTGGGCCAAGGTCAGGTTCGTCAAGTGGCACTACTACGAGGGGGATATCAAGAAAG 14433
||||| ||| | | | | ||||||||||| ||| ||||| || | || || |
Sbjct 5979462 ACATGAACGCCCTGCCCCGCCTGGTCAAGTGGCAGTACCTGGAGGGCGACACCAGCAAGG 5979403
Query 14434 GGGCCCTGTACCCGCCTTGCGACGGCATCCACGTCCACGCCATCTGCATCTTCGGGTCCG 14493
| || | |||||||| ||| |||| ||| | | || |||| |||| |||| | |
Sbjct 5979402 GCGCGCCCTACCCGCCCTGCACCGGCCAGCACCAGCGCTCCGTCTGTATCTACGGGGCGG 5979343
Query 14494 GCGACGTGAAGTGGCTG-AAGAGCGTCCCGCACCTGTTCGCCAACAAGTTCGAC 14546
|||||||| ||| || ||| | | ||||| || |||||||||||||||
Sbjct 5979342 GCGACGTGCCCTGGTTGCTCCAGCAGCAC-CACCTCTTGGCCAACAAGTTCGAC 5979290
>seq34
Length=10022417
Score = 158 bits (174), Expect = 2e-33
Identities = 267/379 (70%), Gaps = 12/379 (3%)
Strand=Plus/Minus
Query 13683 GAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAGA---TCGAGATG 13739
|| |||| || || |||||||||||| || ||| || |||||| ||||||
Sbjct 5254268 GAGGAGGCCGCCTTCCCCATCGCCTACG---TCATGACCCTGCACAAGGAGTTCGAGACC 5254212
Query 13740 TTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGTGGAC 13799
|||||||| ||| | |||| | ||| || || ||| ||||||||||||||||||||
Sbjct 5254211 TTCGAGCGGCTCTTCCGGGCGGTGTACATGCCCCAAAACGTCTACTGCGTCCACGTGGAC 5254152
Query 13800 TCCAAGTC--CGGCGACGAGTTCATCCGGGGCGTCTCGGC-CATCGCCAGGTGCTTCCCT 13856
||||| | |||| | | || | || | ||| |||| | | | | ||||||||
Sbjct 5254151 GCCAAGGCGCCGGCCCCCT-TCCAGCAGGCG-GTC-CGGCGCCTGGTGGGCTGCTTCCCC 5254095
Query 13857 AACGTGGCCCTGGCCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTCGCGTGCAG 13916
|| | ||| ||| |||| | | ||||| |||||| | | ||| ||| |
Sbjct 5254094 AATGCCTTCCTCGCCTCCCGGGCGGAGCGGGTGGTCTACGGCGGCGCGTCCCGCCTGCGG 5254035
Query 13917 GCCGACCTCAGCTGCATGTCGGACCTGGACGCCTCCCCCGTCAAGTGGAGGTACCTGCTC 13976
||||||||| |||||||| |||||| ||||| |||| ||| | |||||||||
Sbjct 5254034 GCCGACCTCCGCTGCATGGGAGACCTGCTGGCCTCGGCCGTGCCCTGGCGCTACCTGCTC 5253975
Query 13977 AACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGGGCGCTGAAG 14036
||| ||||| ||||||||| | |||||||||| ||||||||| ||| |||||||
Sbjct 5253974 AACACCTGCGGCCAGGACTTCCCCTTGAAGACCAACCGGGAGATCGTCCGGCTGCTGAAG 5253915
Query 14037 GCCCTGGGCGGCAAGAACG 14055
| ||| || || |||||||
Sbjct 5253914 GGCCTCGGGGGGAAGAACG 5253896
Score = 87.8 bits (96), Expect = 2e-12
Identities = 116/158 (73%), Gaps = 6/158 (4%)
Strand=Plus/Minus
Query 14153 CAAGGCCCCGCCGCCGCTCAGGATCCCCATCTTTGCGGGAAACGCTTACTTTGCGGTCAC 14212
|||||| || ||||||| || ||| || ||| || ||| ||| | || |||||
Sbjct 5253789 CAAGGCGCCCCCGCCGCACAACATCACCCTCTACTTCGGCTCCGCGTACGTGGCCGTCAC 5253730
Query 14213 CCGGGAGTTCGTGGACTTCGTCCTCAAGGACGAGC---CGGTGGCCCTGCTCATGCACTG 14269
|||| |||||||| ||||| || |||| ||| | || | |||||| || |||
Sbjct 5253729 CCGGCCCTTCGTGGAGTTCGTGCTGCGGGACCAGCGTGCCGTCGACCTGCTG--GC-CTG 5253673
Query 14270 GTTCGAGGACACGTACAGCCCCGACGAGCACCTGTGGG 14307
|| ||||||||| |||||||||||||||||| | ||||
Sbjct 5253672 GTCCGAGGACACCTACAGCCCCGACGAGCACTTCTGGG 5253635
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658729796497920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |