Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aquila_20chrysaetos_20canadensis_20[refseq_20GCF_5F000766835.1_20201
4-10-14] 1,142 sequences; 1,192,743,076 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq39 89.7 5e-13
>seq39
Length=9497852
Score = 89.7 bits (98), Expect = 5e-13
Identities = 111/152 (73%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958
|| || || |||||||| ||||||||||| || || || || ||||| || ||||||||
Sbjct 343648 TATTCTGCTCCAAAGTGCCTCCACTGGAAACCATAAACTGGTCCCAAATCCCCCTCCTCT 343707
Query 6959 CGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTC 7018
| | ||| ||| |||| ||||| || || || || || | ||| ||||| ||||||
Sbjct 343708 CTGGTGCTGAAACCCTGCTTATCCAGGAACTCACGTGATCCATTAGCATCCCAAATCTTC 343767
Query 7019 ACCCCCCGGGACGAGAGCTCCTTGGTGTTCGT 7050
|| || | |||||||| || | |||||
Sbjct 343768 ACACCTTTTGCAGAGAGCTCTTTAGCATTCGT 343799
Score = 89.7 bits (98), Expect = 5e-13
Identities = 111/152 (73%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 34295 ACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTCTCGA 34354
||||| | || |||||||| | || |||||||| ||||| ||| | || || ||
Sbjct 343799 ACGAATGCTAAAGAGCTCTCTGCAAAAGGTGTGAAGATTTGGGATGCTAATGGATCACGT 343740
Query 34355 GACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTAC 34414
|| || ||||| |||| ||| ||| | | |||||||| || ||||| || || ||
Sbjct 343739 GAGTTCCTGGATAAGCAGGGTTTCAGCACCAGAGAGGAGGGGGATTTGGGACCAGTTTAT 343680
Query 34415 GGGTTCCAGTGGAGACACTTTGGGGCGGAGTA 34446
|| ||||||||||| |||||||| || || ||
Sbjct 343679 GGTTTCCAGTGGAGGCACTTTGGAGCAGAATA 343648
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448256001054240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |