Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aquila_20chrysaetos_20canadensis_20[refseq_20GCF_5F000766835.1_20201
4-10-14] 1,142 sequences; 1,192,743,076 total letters
Query= NC_029255.1
Length=129563
Score E
Sequences producing significant alignments: (Bits) Value
seq118 104 2e-17
seq39 102 7e-17
>seq118
Length=3057061
Score = 104 bits (114), Expect = 2e-17
Identities = 107/140 (76%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 3245 GTTGTTGATGAGCTCTTCCGAGATGGGGTAAACTGGGGGCGCATTGTTGCTTTCTTTGAG 3304
|| || || |||||||||||||| || || |||||||| | || || || ||||| |||
Sbjct 2914604 GTGGTGGAGGAGCTCTTCCGAGACGGCGTTAACTGGGGCAGGATCGTGGCCTTCTTCGAG 2914545
Query 3305 TTTGGTGGTGTTATGTGTGTGGAAAGCGTCAATAGAGGCATACCCTCCCTCGTTGACAAC 3364
|| || || || ||||| ||||| |||||||| | | || | ||||||| |||| |
Sbjct 2914544 TTCGGCGGCGTGATGTGCGTGGAGAGCGTCAACCGGGAGATGTCTCCCCTCGTAGACAGC 2914485
Query 3365 ATTGCCGCGTGGATGACAGA 3384
|| ||||| |||||||| ||
Sbjct 2914484 ATCGCCGCCTGGATGACCGA 2914465
>seq39
Length=9497852
Score = 102 bits (112), Expect = 7e-17
Identities = 119/161 (74%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 118534 AGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGA 118593
|||||||| | || ||||||||||| || | || |||||||| | ||| |||||
Sbjct 340011 AGCCCTGTGACATGGGCAATCATGTAAGTGAGCAGTGAATAGCTGGCAATATTGAAAGGC 340070
Query 118594 ACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCA 118653
|| || || ||||| ||| | || ||||| || | ||||||||| | || |||||| |
Sbjct 340071 ACTCCTAGTCCCATATCTCCAGACCTCTGATAGAGTTGGCAAGACAATTCACCGTTTAGA 340130
Query 118654 ACATAAAACTGACTTATGATGTGACATGGAGGCAGAACCAT 118694
||||| ||||| | | | || |||||||||||| ||||
Sbjct 340131 ACATAGAACTGGCAAAGGGCATGGCATGGAGGCAGAGCCAT 340171
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414471031260088
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |