Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aquila_20chrysaetos_20canadensis_20[refseq_20GCF_5F000766835.1_20201
4-10-14] 1,142 sequences; 1,192,743,076 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq36 163 7e-35
seq80 152 1e-31
>seq36
Length=10026654
Score = 163 bits (180), Expect = 7e-35
Identities = 158/203 (78%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 210915 AGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTG 210974
|| ||||| || || |||||||| || || | ||||| | ||||||||||||||||||
Sbjct 5148313 AGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCATCTTCCAGCTGCTTG 5148254
Query 210975 CCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGT 211034
|| || ||||| || | || || ||||| |||| ||||||||||||||||||||
Sbjct 5148253 CCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCC 5148194
Query 211035 TTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGA 211094
|| || || || ||||||||| | ||||||||| || ||||| ||||| || || ||
Sbjct 5148193 TTGACATTCTCAATGGTGTCACTGGGTTCAACCTCAAGGGTGATGGTCTTGCCAGTCAGG 5148134
Query 211095 GTCTTTACAAACACCTGCATTTT 211117
||||| ||||| | |||||||||
Sbjct 5148133 GTCTTCACAAAGATCTGCATTTT 5148111
>seq80
Length=5371318
Score = 152 bits (168), Expect = 1e-31
Identities = 161/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| ||||| || || ||||| || || |||||||| || || | ||||| | ||||||
Sbjct 4804763 AGCACAAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 4804822
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||||||||||||| || ||||| || | || || ||||| |||| ||||||||||||
Sbjct 4804823 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCC 4804882
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || || || || ||||||||| | ||||| || || || || |||
Sbjct 4804883 TGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACTTCCAGGGTTATGGTC 4804942
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || || ||||| ||||| | ||||||
Sbjct 4804943 TTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 4804974
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159135039432830
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |