Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aquila_20chrysaetos_20canadensis_20[refseq_20GCF_5F000766835.1_20201
4-10-14] 1,142 sequences; 1,192,743,076 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq36 127 5e-24
seq80 123 6e-23
seq68 89.7 1e-12
seq51 84.2 5e-11
>seq36
Length=10026654
Score = 127 bits (140), Expect = 5e-24
Identities = 150/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 225514 AGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTC 225573
|| |||||||| || |||| ||||| |||| || || | |||||||| ||||||||
Sbjct 5148313 AGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCATCTTCCAGCTGCTTG 5148254
Query 225574 CCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGC 225633
||||| ||||| || | || || || || ||||| ||||||||||| |||||||| |
Sbjct 5148253 CCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCC 5148194
Query 225634 TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAA 225693
|| ||| || |||||||| || ||| || || | ||||| |||||||| ||||
Sbjct 5148193 TTGACATTCTCAATGGTGTCACTGGGTTCAACCTCAAGGGTGATGGTCTTGCCAGTCAGG 5148134
Query 225694 GTTTTTATGAACACTTGCATTTT 225716
|| || | || | ||||||||
Sbjct 5148133 GTCTTCACAAAGATCTGCATTTT 5148111
>seq80
Length=5371318
Score = 123 bits (136), Expect = 6e-23
Identities = 142/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560
||| ||||| || || |||||||| || |||| ||||| || | || || | ||||||
Sbjct 4804762 CAGCACAAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATC 4804821
Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620
||| |||||||| ||||| ||||| || | || || || || ||||| |||||||||||
Sbjct 4804822 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTC 4804881
Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680
|||||||| ||| ||| || |||||||| || || || || | || || ||
Sbjct 4804882 CTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACTTCCAGGGTTATGGT 4804941
Query 225681 CTTGCCCGTCA 225691
|||||| ||||
Sbjct 4804942 CTTGCCAGTCA 4804952
>seq68
Length=6120357
Score = 89.7 bits (98), Expect = 1e-12
Identities = 124/174 (71%), Gaps = 0/174 (0%)
Strand=Plus/Minus
Query 7551 CCAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTAT 7610
|||| | ||||| || | | || || |||||||| || || || ||||| | || ||
Sbjct 3676483 CCAAATCTACAATGTAGTCGTCACTGCCCATGCCTTCGTAATAATCTTCTTCATGGTCAT 3676424
Query 7611 GCCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGA 7670
|| |||| || || ||||||||||| ||| | || || | || || | ||||||||
Sbjct 3676423 ACCAATTATAATCGGAGGTTTCGGAAACTGACTTGTCCCGCTCATAATCAGCGCTCCTGA 3676364
Query 7671 TATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTT 7724
|| || |||||| | | ||||| || || || ||| |||| || || |||||
Sbjct 3676363 CATAGCCTTTCCACGCATAAACAACATGAGCTTCTGACTACTCCCTCCATCCTT 3676310
>seq51
Length=7971058
Score = 84.2 bits (92), Expect = 5e-11
Identities = 120/169 (71%), Gaps = 0/169 (0%)
Strand=Plus/Plus
Query 7556 TTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGG 7615
||||||| || | | || || ||||||||||| || || ||||| | ||||| |||
Sbjct 6161875 TTTACAATGTAGTCGTCACTGCCCATGCCTTTGTAATAATCTTCTTCATGGTTATACCGA 6161934
Query 7616 TTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGG 7675
|||| | || || |||||||| ||| | || || | || ||||||||||| | || |
Sbjct 6161935 TTATAACCGGGGGCTTCGGAAACTGACTTGTCCCACTTATAATTGGTGCTCCCAACATAG 6161994
Query 7676 CTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTT 7724
|||| ||| | || || ||| | || ||| |||| || | |||||
Sbjct 6161995 CTTTCCCACACATAAATAACATACGCTTCTGACTACTCCCCCGATCCTT 6162043
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192513751032548
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |