Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aquila_20chrysaetos_20canadensis_20[refseq_20GCF_5F000766835.1_20201
4-10-14] 1,142 sequences; 1,192,743,076 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq20 107 2e-18
seq6 107 2e-18
>seq20
Length=13035929
Score = 107 bits (118), Expect = 2e-18
Identities = 105/134 (78%), Gaps = 1/134 (1%)
Strand=Plus/Plus
Query 4562 ATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACC 4621
|| || |||| | ||||| || || ||||| |||||||| || | ||| |||||||| ||
Sbjct 5722755 ATTCATACCT-CATCTCTACTGATGAGTTCATTAGAAAAAGTGAGTCCAGGCATTAATCC 5722813
Query 4622 TCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGC 4681
|| || || |||||||| || | ||||| || ||||||||||| || ||||| || ||
Sbjct 5722814 CCTTTTCTTCAGCCAAAAAATTGATGCAAAAGAGCCAGAAAAGAAGATTCCTTCCACTGC 5722873
Query 4682 GGCAAACGCTACTA 4695
||||| |||||||
Sbjct 5722874 TGCAAAAGCTACTA 5722887
Score = 93.3 bits (102), Expect = 4e-14
Identities = 83/104 (80%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 4812 TCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCA 4871
|||| ||| || ||||| || || || || |||||||| |||||||||||||| || |||
Sbjct 5724890 TCTTTAATGTAGGTGTCAATAAGAAGACTGTACATTTCTGAATGTATATTTTCCATGGCA 5724949
Query 4872 ATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTC 4915
||||| || || || || || | ||||||||| | ||| |||||
Sbjct 5724950 ATCTGGAAGCCATAGAAACAGCGAGCTTCTGTGATTTGTACTTC 5724993
>seq6
Length=21260008
Score = 107 bits (118), Expect = 2e-18
Identities = 97/122 (80%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 4572 TCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTA 4631
|| ||||||||||| ||||| || || || || | ||| ||||| | || ||||| ||
Sbjct 17300070 TCATCTCTGCTAATAAGTTCATTGGAGAAAGTCAGTCCAGGCATCAGGCCCCTCTTCTTC 17300011
Query 4632 AGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCT 4691
|||||||||||||| ||||| || || |||||||| |||||||| || || ||||| ||
Sbjct 17300010 AGCCAAAATATAGCAGCAAAGGAACCCGAAAAGAAGATGCCTTCAACTGCAGCAAAAGCA 17299951
Query 4692 AC 4693
||
Sbjct 17299950 AC 17299949
Score = 100 bits (110), Expect = 2e-16
Identities = 101/130 (78%), Gaps = 1/130 (1%)
Strand=Plus/Minus
Query 4922 AAATCTTTCT-ACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAA 4980
||| |||||| || | |||||| ||||| || || ||||||||||||||||| |||| ||
Sbjct 17295759 AAAGCTTTCTCACCAGGTTTTCATTTACAATTCCATCACTGGCTGCAAAAAATGCCAGAA 17295700
Query 4981 CATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAG 5040
||||||| ||||||| | ||| || | || || || |||||||| || | || || |
Sbjct 17295699 CATGAGAGATAAAGTGTTTTTCATCTGCTTTCAGCTTGTTCCAGTGAGGAAGGTCCTTTG 17295640
Query 5041 TTAAATCAAC 5050
||||||||
Sbjct 17295639 ACAAATCAAC 17295630
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427043656270286
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |