Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aquila_20chrysaetos_20canadensis_20[refseq_20GCF_5F000766835.1_20201
4-10-14] 1,142 sequences; 1,192,743,076 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq80 114 3e-20
seq36 102 2e-16
>seq80
Length=5371318
Score = 114 bits (126), Expect = 3e-20
Identities = 155/215 (72%), Gaps = 6/215 (3%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| |||||||| || || || || || ||||||||||| || | | || | |||||||
Sbjct 4804763 AGCACAAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 4804822
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || || || ||||| ||||||||||| || | | || |||||||| ||
Sbjct 4804823 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCC 4804882
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069
|| || || |||||| |||| | | |||| ||| ||| ||||| || || ||
Sbjct 4804883 TGGATCTTGGCCTTGACATTCTCAATGGTGTC---ACTGGGCTCAACTTCCAGGGTTATG 4804939
Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| ||||| || || |||||||| |||| ||||||
Sbjct 4804940 GTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 4804974
>seq36
Length=10026654
Score = 102 bits (112), Expect = 2e-16
Identities = 147/206 (71%), Gaps = 6/206 (3%)
Strand=Plus/Minus
Query 151905 AGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTC 151964
|| || || || || ||||||||||| |||| | || | |||||||| || ||
Sbjct 5148313 AGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCATCTTCCAGCTGCTTG 5148254
Query 151965 CCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGT 152024
|| || ||||| ||||||||||| || | | || |||||||| || || || ||
Sbjct 5148253 CCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCC 5148194
Query 152025 TTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATAGTTTTGCCCGTG 152081
|||||| |||| | | |||| ||| || || ||||| || || || ||||| ||
Sbjct 5148193 TTGACATTCTCAATGGTGTC---ACTGGGTTCAACCTCAAGGGTGATGGTCTTGCCAGTC 5148137
Query 152082 AGAGTCTTCACGAAGACCTGCATTTT 152107
|| |||||||| |||| |||||||||
Sbjct 5148136 AGGGTCTTCACAAAGATCTGCATTTT 5148111
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153803917438282
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |