Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aquila_20chrysaetos_20canadensis_20[refseq_20GCF_5F000766835.1_20201 4-10-14] 1,142 sequences; 1,192,743,076 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq80 114 3e-20 seq36 102 2e-16 >seq80 Length=5371318 Score = 114 bits (126), Expect = 3e-20 Identities = 155/215 (72%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || |||||||| || || || || || ||||||||||| || | | || | ||||||| Sbjct 4804763 AGCACAAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 4804822 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || || ||||| ||||||||||| || | | || |||||||| || Sbjct 4804823 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCC 4804882 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || || || |||||| |||| | | |||| ||| ||| ||||| || || || Sbjct 4804883 TGGATCTTGGCCTTGACATTCTCAATGGTGTC---ACTGGGCTCAACTTCCAGGGTTATG 4804939 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| || || |||||||| |||| |||||| Sbjct 4804940 GTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 4804974 >seq36 Length=10026654 Score = 102 bits (112), Expect = 2e-16 Identities = 147/206 (71%), Gaps = 6/206 (3%) Strand=Plus/Minus Query 151905 AGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTC 151964 || || || || || ||||||||||| |||| | || | |||||||| || || Sbjct 5148313 AGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCATCTTCCAGCTGCTTG 5148254 Query 151965 CCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGT 152024 || || ||||| ||||||||||| || | | || |||||||| || || || || Sbjct 5148253 CCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCC 5148194 Query 152025 TTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATAGTTTTGCCCGTG 152081 |||||| |||| | | |||| ||| || || ||||| || || || ||||| || Sbjct 5148193 TTGACATTCTCAATGGTGTC---ACTGGGTTCAACCTCAAGGGTGATGGTCTTGCCAGTC 5148137 Query 152082 AGAGTCTTCACGAAGACCTGCATTTT 152107 || |||||||| |||| ||||||||| Sbjct 5148136 AGGGTCTTCACAAAGATCTGCATTTT 5148111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153803917438282