Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aquila_20chrysaetos_20canadensis_20[refseq_20GCF_5F000766835.1_20201 4-10-14] 1,142 sequences; 1,192,743,076 total letters Query= NC_033176.1 Length=224064 Score E Sequences producing significant alignments: (Bits) Value seq69 152 7e-32 seq28 96.9 5e-15 >seq69 Length=6109482 Score = 152 bits (168), Expect = 7e-32 Identities = 179/242 (74%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 9244 ATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGTTCTTGTTTCAGA 9303 ||||| | | | || |||||||| ||||| ||| ||| |||||||| || |||||||| Sbjct 4100588 ATGAGCCTACTAGTTTGGAACAGCTGCTCATCATCCCACTCTGGATGCTCCTGTTTCAGG 4100647 Query 9304 ACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATCATGAGCCCAGGT 9363 | || || |||| |||||||||||| ||||| || || || |||||||| | || || Sbjct 4100648 ATGTCACAGACCCGGTTGTGTTCCCTCAGCCATATTGTAGCATACATCATCAAGCCTGGG 4100707 Query 9364 ACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGCACTTCGGGAGGA 9423 |||| || || |||| || || |||| | ||| || ||| || || | ||||| Sbjct 4100708 ACCAAACCGAACACCTCCTGCCCAACAGAAAATTGCAGGTGTTCAGGTACATGAGGAGGG 4100767 Query 9424 TAGATCATGTGCACCTGGACGTCTTTGACCGAGGGGGGATACATTTCACCGTCAATCATC 9483 |||||||| | |||| ||| || || | || ||||||||||| |||||||||||| Sbjct 4100768 TAGATCATATCAGCCTGAGTGTCCTTCACTGTTGGTGGATACATTTCTCCGTCAATCATC 4100827 Query 9484 TG 9485 || Sbjct 4100828 TG 4100829 Score = 145 bits (160), Expect = 1e-29 Identities = 225/320 (70%), Gaps = 1/320 (0%) Strand=Plus/Plus Query 8289 GGAACGCGGCCAACGGACACCCCTTGACGTTGCTACAGACTAGAGACTGAATAGTTGCGC 8348 |||| || | || ||||| || || || ||| | |||| || ||| | | || Sbjct 4098585 GGAAAGCAGTGAAAGGACAGCCTTTCACATTGTTGCAGATAAGCTTCTGTAAGGAGGCAG 4098644 Query 8349 TCTTGACGATCCCGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGG 8408 | |||| || | || ||||| | ||| || |||||||| |||||||||||| | |||| Sbjct 4098645 TATTGATTATTTCAAAGCCCACTTTTCCACCAAAGGTGCTAGGCTTCCAGTACTCAGGGG 4098704 Query 8409 AGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGC 8468 ||||||| | || |||| || ||||| || |||||||| || || | ||| | || Sbjct 4098705 AGCAGATAGCATTTCCCATCAGTCCTTTCAGAGAGAACGGTGCTCCAATCTCCACCATTG 4098764 Query 8469 TCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCA 8528 | ||||| |||||||| || || |||||||| || | | || | ||||||||||| Sbjct 4098765 TTTCACCAAAGATGGCACCTGGTCGTGGCTTTTCTACGAGAAGGCCTGGGTACAGCTCCA 4098824 Query 8529 CAGCCTCGACGTCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTTTTCTCCTGT-T 8587 ||| || | ||| || ||||| | ||||| || || || || ||||||||||| Sbjct 4098825 TAGCATCAATGTCGCCATAAAGCTCTTCCAGTTCAGCTGCCATTTCTTTTTCTCCTGTAA 4098884 Query 8588 TTATTAATAAAAAATAACAT 8607 ||||| || | ||| | ||| Sbjct 4098885 TTATTGATGAGAAAAACCAT 4098904 >seq28 Length=10738426 Score = 96.9 bits (106), Expect = 5e-15 Identities = 128/178 (72%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 8373 CTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGTTCGCCATGAGGC 8432 |||| ||||| || ||||| ||||||||| | |||||||||||| ||| | | || | Sbjct 1123250 CTCCACCGAATGTACTGGGTTTCCAGTACTCTGGGGAGCAGATGGGGTTTCCAAGAAGCC 1123309 Query 8433 CTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGATGGCGTTGGGAC 8492 | || ||||| |||||||| || | ||| | ||||| || || || || | ||||| Sbjct 1123310 CCTTCAGGGAAAACGGAGCTCCGATCTCCACCATGCTTTCCCCAAAAATACCATTGGGTT 1123369 Query 8493 GGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACAGCCTCGACGTCTCCGTAAAG 8550 |||| || || | || || || | || | ||||| ||| || | |||||| || || Sbjct 1123370 GGGGTTTCTCAAGCAGCAAGCCCGGATAAAACTCCAGAGCATCAATGTCTCCATACAG 1123427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716866566583680