Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ara_20macao_20[genbank_20GCA_5F000400695.1_202013-06-26] 192,790 sequences; 1,204,700,227 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq37509 114 2e-20 >seq37509 Length=19668 Score = 114 bits (126), Expect = 2e-20 Identities = 216/310 (70%), Gaps = 12/310 (4%) Strand=Plus/Minus Query 83056 GAGCAGGGCCTCGATGTCGGGCTCCA-CGGC-CAGGGTCTGGCAGCGGTGGCTGTACCTG 83113 ||| ||| || |||||||||||||| | || | | | | | |||| ||||||| | Sbjct 18580 GAGGAGGCGCTGGATGTCGGGCTCCAGCTGCGCCGCGGCCGT--GCGGGGGCTGTAGCGC 18523 Query 83114 CGCACGGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTG 83173 || | ||| || |||| ||||||| |||||||||||||||||||| | |||| | Sbjct 18522 CGGAAGGGTTCCCCTTCAGGTCCCACCAGGAACTTCTCGAAGTTCCAGGAGATGTCGGAG 18463 Query 83174 CGGCACACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTCG 83233 || | | || |||||| | || | | || || || ||| || | ||||| Sbjct 18462 CGCCGGATGGGGCTCCAGGCCAGGAACCGCGGCTCCGACATGAGGGTCACCGCCTCGTCC 18403 Query 83234 CTAGGCGCCGGCAG--GGCCTCTCGTAGGAAGGCGAAGAGCGGATG--TGCCCTTGCACC 83289 || || ||||| || || ||| ||||||||| ||| || || || || || Sbjct 18402 GCCGGAGCGGGCAGATGGAGCTTC--AGGTAGGCGAAGACCGGGTGCGTGTCC--GCGCC 18347 Query 83290 GTTGACCTCGCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGAC 83349 ||| |||| |||||||| ||| || | ||||| |||||||||||| ||| || || || Sbjct 18346 GTTCACCTGGCACTTCTGGAACAGGGTGAAGTTGGGCTCGAAGCCGCCCCCCGGCCGCAC 18287 Query 83350 GTGCTTCAGG 83359 |||||||||| Sbjct 18286 GTGCTTCAGG 18277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 607329675811600