Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ara_20macao_20[genbank_20GCA_5F000400695.1_202013-06-26] 192,790 sequences; 1,204,700,227 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq156087 100 2e-16 seq159201 95.1 8e-15 >seq156087 Length=3981 Score = 100 bits (110), Expect = 2e-16 Identities = 115/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 97117 GTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176 ||||||||||| |||||| |||| | | |||||||| ||||| || |||||||| ||| Sbjct 3270 GTGACATGGGCAATCATATAAGTAAGCAATGAATAGCTGGCAATATTGAAAGGCACTCCT 3329 Query 97177 AGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAA 97236 ||||||||||| | || || ||||| | || || || | | ||||| ||||| Sbjct 3330 AGTCCCATATCTCCAGACCTCTGATAGAGTTGGCATGACAATTCACCATCGAGAACATAG 3389 Query 97237 AACTGACTCAATACATGACAGGGGGGCAACGCCAT 97271 ||||| | | | |||| || || ||||| ||||| Sbjct 3390 AACTGGCAAAGTGCATGGCATGGAGGCAAAGCCAT 3424 >seq159201 Length=4296 Score = 95.1 bits (104), Expect = 8e-15 Identities = 110/148 (74%), Gaps = 8/148 (5%) Strand=Plus/Plus Query 97402 TATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCT 97461 |||||||||||||| |||||||| ||||| |||||||| ||||| | || || || ||| Sbjct 2342 TATTCTGCTCCAAAGTGCCTCCACTGGAAACCATAAACTGGTCCCAAATCCCCCTCCTCT 2401 Query 97462 CTATCACAGAAACCAAGCTTATCTAAATAGGACCT----AGATCCATTTGCATCCCAAAT 97517 || | |||||| ||||||| |||| || || ||||| ||||||||||| Sbjct 2402 CTGGTGCTGAAACCCTGCTTATC----CAGGAACTCACGTGACCCATTAGCATCCCAAAT 2457 Query 97518 GTGCACACCAGATGCTGCAAGCTCTTTG 97545 | |||||| ||| | ||||||||| Sbjct 2458 CTTCACACCTTTTGCAGAGAGCTCTTTG 2485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 345969186560300