Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ara_20macao_20[genbank_20GCA_5F000400695.1_202013-06-26] 192,790 sequences; 1,204,700,227 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq7256 105 1e-17 >seq7256 Length=43362 Score = 105 bits (116), Expect = 1e-17 Identities = 111/146 (76%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 52185 GGTACAGTTCCATATAGCTATAGGACATACTGCTATGTCCATTTACATAGATTGCCCGTT 52244 ||| ||||||||| | |||| || || || || ||||| ||||| || ||||| || || Sbjct 33688 GGTGCAGTTCCATGTGACTATTGGCCACACAGCCATGTCTATTTATATTGATTGTCCTTT 33747 Query 52245 TCCAAAATGGATACAGTGGTCAGTTATTATCTATTCTATTAGTTTCATATTACTGTTTGG 52304 || || ||||| || ||| || ||| ||||| |||| | ||||| || |||||||| Sbjct 33748 CCCTAAGTGGATGCACTGGGGTGTAATTTTCTATGCTATCACCTTCATTTTCCTGTTTGG 33807 Query 52305 TAACTTCTATTTTAGAACATACAAGA 52330 ||||||||| | | | ||||| |||| Sbjct 33808 TAACTTCTACTATCGGACATATAAGA 33833 Score = 95.1 bits (104), Expect = 2e-14 Identities = 100/132 (76%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 52057 GCATTTTTTGGAGCTCAGCTAAATTCTTTTATCCATGTTATTATGTACACTTATTATGGT 52116 || ||||| ||||||||| | ||| | ||||| ||||| |||||||||| |||||||| Sbjct 33061 GCTTTTTTCGGAGCTCAGATGAATGCATTTATTCATGTCATTATGTACATGTATTATGGA 33120 Query 52117 ATGGCCGCTTGTGGTCCTATGTTCAGAAAGTATCTATGGTGGAAACGTTATCTTACTATA 52176 | || || ||||| |||| || ||| || | ||||||||||| || | || ||| Sbjct 33121 TTAGCTGCCTGTGGCCCTAAATTTCAAAAATACTTGTGGTGGAAACGATACTTGACCATA 33180 Query 52177 ATGCAGTTGGTA 52188 |||| |||||| Sbjct 33181 TTGCAATTGGTA 33192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 920972011111600