Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ara_20macao_20[genbank_20GCA_5F000400695.1_202013-06-26] 192,790 sequences; 1,204,700,227 total letters Query= NC_002229.3 Length=177874 Score E Sequences producing significant alignments: (Bits) Value seq47462 114 1e-20 >seq47462 Length=23114 Score = 114 bits (126), Expect = 1e-20 Identities = 117/152 (77%), Gaps = 7/152 (5%) Strand=Plus/Plus Query 139505 GTGTGGGAGCGACGCCGTCCGCGCGCCCCACGGCGCAggggggcgcgggggttgccccgg 139564 |||| |||||| |||||||||||| ||||||| |||| |||||| || || ||| Sbjct 22964 GTGTCGGAGCGGCGCCGTCCGCGCATCCCACGGTTGAGGGAAGCGCGGCGGCTGTGCCGA 23023 Query 139565 gggcgccgctcccgtgttgctctgctggg------ggcgcggggccgcgcgcCGCATCTC 139618 || ||||||| |||| ||||||||||||| ||||||||| || || | ||| Sbjct 23024 GGACGCCGCT-CCGTTTTGCTCTGCTGGGGTCCCCGGCGCGGGGACGAGCCCTCTCGCTC 23082 Query 139619 CCGGGCGCCGCCGAGGCTGACAGAGGCGAACT 139650 || |||||||||||||||||||| |||||| Sbjct 23083 CCCACCGCCGCCGAGGCTGACAGAGACGAACT 23114 Score = 114 bits (126), Expect = 1e-20 Identities = 117/152 (77%), Gaps = 7/152 (5%) Strand=Plus/Minus Query 1970 AGTTCGCCTCTGTCAGCCTCGGCGGCGCCCGGGAGATGCGgcgcgcggccccgcgcc--- 2026 |||||| |||||||||||||||||||| ||||| | || || ||||||||| Sbjct 23114 AGTTCGTCTCTGTCAGCCTCGGCGGCGGTGGGGAGCGAGAGGGCTCGTCCCCGCGCCGGG 23055 Query 2027 ---cccagcagagcaacacgggagcggcgcccccggggcaacccccgcgccccccTGCGC 2083 ||||||||||||| |||| ||||||| || ||| || || |||||| |||| | Sbjct 23054 GACCCCAGCAGAGCAAAACGG-AGCGGCGTCCTCGGCACAGCCGCCGCGCTTCCCTCAAC 22996 Query 2084 CGTGGGGCGCGCGGACGGCGTCGCTCCCACAC 2115 |||||| |||||||||||| |||||| |||| Sbjct 22995 CGTGGGATGCGCGGACGGCGCCGCTCCGACAC 22964 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 567697415325600