Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ara_20macao_20[genbank_20GCA_5F000400695.1_202013-06-26] 192,790 sequences; 1,204,700,227 total letters Query= NC_002641.1 Length=159160 Score E Sequences producing significant alignments: (Bits) Value seq29575 100 3e-16 >seq29575 Length=72502 Score = 100 bits (110), Expect = 3e-16 Identities = 94/118 (80%), Gaps = 4/118 (3%) Strand=Plus/Plus Query 157083 GCCATGGCTGACTCCCTGAAGGAAGAAACGGCGTTGCTGCTGGAGGATTACTTCCAGCAC 157142 |||||| | | ||| ||||||||||| |||||| ||||||||||||| |||||||||||| Sbjct 4283 GCCATGCCGGGCTCGCTGAAGGAAGAGACGGCGCTGCTGCTGGAGGACTACTTCCAGCAC 4342 Query 157143 TGCTGCGGCAAGGAA--GGGCCGCCGCCGAGTCCTACGGCGGCAGAGCTGCGGCGAGC 157198 || ||||| || | | || ||| || || || |||||||| ||||||||| || Sbjct 4343 CGCAGCGGC--GGCAGCGCGCTGCCTCCCAGCCCCACGGCGGCCACGCTGCGGCGGGC 4398 Score = 98.7 bits (108), Expect = 1e-15 Identities = 108/146 (74%), Gaps = 4/146 (3%) Strand=Plus/Minus Query 125370 CCTCTCTCGCCGCTCCAGCTCGGCCGCCGCTCGCCGNNNNNNNNNNNNNGTAGGACTCGG 125429 || ||| |||| ||||||||||||||||| ||||| || || || || Sbjct 4426 CCGCTCCTGCCGTTCCAGCTCGGCCGCCGCCCGCCGCAGCGTGGCCGCCGTGGGGCTGGG 4367 Query 125430 CGGCGGCCC--TTCCTTGCCGCAGCAGTGCTGGAAGTAATCCTCCAGCAGCAACGCCGTT 125487 ||| || | | || ||||| || |||||||||||| ||||||||||||| |||||| Sbjct 4366 AGGCAGCGCGCTGCC--GCCGCTGCGGTGCTGGAAGTAGTCCTCCAGCAGCAGCGCCGTC 4309 Query 125488 TCTTCCTTCAGGGAGTCAGCCATGGC 125513 ||||||||||| ||| | | |||||| Sbjct 4308 TCTTCCTTCAGCGAGCCCGGCATGGC 4283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507956930208000