Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ara_20macao_20[genbank_20GCA_5F000400695.1_202013-06-26]
192,790 sequences; 1,204,700,227 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq64820 114 1e-20
seq148742 111 2e-19
>seq64820
Length=6338
Score = 114 bits (126), Expect = 1e-20
Identities = 107/136 (79%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 13894 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13953
||||||||||||| || ||||| || ||||| || | ||| ||||| ||||||| |||||
Sbjct 3454 CCTCATCTCTACTGATGAGTTCATTAGAAAAGGTGAGTCCAGGCATTAATCCTCTTTTTT 3395
Query 13954 ttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14013
| | |||||| |||| ||||| || || || ||||| ||||| || ||||| || || |
Sbjct 3394 TCAGCCAAAAAATTGATGCAAAAGAGCCAGAGAAGAAGATTCCTTCCACTGCTGCGAAAG 3335
Query 14014 CTATTAATCGTTCTCC 14029
||| || ||||| ||
Sbjct 3334 CTACTACACGTTCCCC 3319
Score = 82.4 bits (90), Expect = 7e-11
Identities = 78/100 (78%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 14125 TCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGT 14184
||||||| | | | |||||| || |||||||| | || |||||||| || |||||||
Sbjct 1377 TCTCTTTGGAATCTTTAATGTAGGTGTCAATAAGAAGACTGTACATTTCTGAATGTATGT 1318
Query 14185 TTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTC 14224
||||||| || ||||| || ||||| || || | ||||||
Sbjct 1317 TTTCCATGGCAATCTGGAAGCCATAGAAACAGCGAGCTTC 1278
>seq148742
Length=4363
Score = 111 bits (122), Expect = 2e-19
Identities = 97/121 (80%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 13894 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13953
|||||||||| ||||||||||| || || || || | |||||||||| || | || |
Sbjct 501 CCTCATCTCTGCTAATAAGTTCATTGGAGAAAGTCAGCCCTGGCATCAGGCCCCTCTTCT 442
Query 13954 ttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14013
| | ||||||||| |||||||| || || |||||||| || || |||||||||||||| |
Sbjct 441 TCAGCCAAAATATAGCAGCAAAGGAACCCGAAAAGAAGATGCCTTCAACTGCAGCAAAGG 382
Query 14014 C 14014
|
Sbjct 381 C 381
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478571915486000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |