Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ara_20macao_20[genbank_20GCA_5F000400695.1_202013-06-26] 192,790 sequences; 1,204,700,227 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq184617 84.2 3e-11 >seq184617 Length=12361 Score = 84.2 bits (92), Expect = 3e-11 Identities = 141/201 (70%), Gaps = 6/201 (3%) Strand=Plus/Plus Query 164501 TAGGCTGTAAACATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACAT 164560 ||||||| || ||| | ||||| || | || |||||||||| || || ||||||||| Sbjct 1557 TAGGCTGCAAGCATGTGAAAGGCATCCTCTTGTATGGACCTCCAGGCTGTGGTAAAACAC 1616 Query 164561 TAATGGCTCGATGCATTGCTCAAGCTTTTAAATCGC---GACCCGTTAAAATTGTTAATG 164617 | ||||| || |||| |||| | | ||| | || ||| || | || |||| Sbjct 1617 TTATGGCGAGACAGATTGG-CAAGATGCTGAATGCCAGAGAACCG--AAGGTGGTCAATG 1673 Query 164618 GTCCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTC 164677 |||| ||| | | || |||||||| || ||||| || || || | | ||| ||||| Sbjct 1674 GTCCAGAAATCCTCAATAAATATGTGGGCGAGTCCGAGGCCAACATCCGCAAGCTGTTTG 1733 Query 164678 AGGAGGCTGAAGAAGAACAAA 164698 || || ||||||||||||| Sbjct 1734 CTGATGCAGAAGAAGAACAAA 1754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594436022964000