Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ara_20macao_20[genbank_20GCA_5F000400695.1_202013-06-26]
192,790 sequences; 1,204,700,227 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq141467 158 2e-34
seq144467 138 2e-28
seq12692 136 6e-28
seq180045 100 4e-17
>seq141467
Length=739
Score = 158 bits (174), Expect = 2e-34
Identities = 182/245 (74%), Gaps = 0/245 (0%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| ||||| || |||| || || || || ||||| || ||||||||||| || ||
Sbjct 534 CGCCAAGCGCCACCGCAAGGTGCTCCGCGACAATATCCAGGGCATCACCAAGCCGGCCAT 475
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| || |||||||| ||||| || || ||||| | || || || ||||||| ||||
Sbjct 474 CCGGCGCCTGGCTCGGCGTGGCGGCGTGAAGCGCATTTCGGGTCTGATCTATGAGGAGAC 415
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | ||| |||||| | ||||| ||| ||| |||| |||||| || |||||| ||
Sbjct 414 GCGCGGTGTGTTGAAGGTGTTCCTGGAGAACGTGATCCGCGATGCTGTCACCTATACGGA 355
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||||||| | ||||| ||||| | |||||| | || ||||| |||| || || ||
Sbjct 354 GCACGCTAAGAGGAAGACGGTCACAGCTATGGATGTGGTTTATGCTCTGAAGCGGCAGGG 295
Query 16672 CCGTA 16676
||||
Sbjct 294 ACGTA 290
>seq144467
Length=43936
Score = 138 bits (152), Expect = 2e-28
Identities = 187/261 (72%), Gaps = 0/261 (0%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| ||||| || |||| | || || || || ||||| || ||||||||||| || ||
Sbjct 15752 CGCCAAGCGGCACCGCAAAGTGCTGCGCGACAATATCCAGGGCATCACCAAGCCGGCCAT 15811
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| || |||||||| ||||| || || ||||| |||| || | |||| || ||||
Sbjct 15812 CCGCCGCCTGGCTCGGCGTGGCGGTGTGAAGCGCATCTCGGGGCTCATCTACGAGGAGAC 15871
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | || ||||| ||||| | ||| ||| |||| ||||| || ||| || ||
Sbjct 15872 GCGCGGCGTGTTGAAAGTCTTCTTGGAGAACGTGATCCGCGATGCCGTCACCTACACGGA 15931
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||||||| | ||||| || ||| ||||||| | || ||||| |||| || || ||
Sbjct 15932 GCACGCTAAGAGGAAGACGGTGACCGCCATGGACGTGGTTTATGCTCTGAAGCGGCAGGG 15991
Query 16672 CCGTAAGATTTATGGTTTTGG 16692
|| | | || || |||||
Sbjct 15992 ACGCACTCTCTACGGCTTTGG 16012
>seq12692
Length=1462
Score = 136 bits (150), Expect = 6e-28
Identities = 191/268 (71%), Gaps = 0/268 (0%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| ||||| || || | | || || || || ||||| || ||||||||||| |||||
Sbjct 1428 CGCCAAGCGGCACCGGAAAGTGCTGCGCGACAATATCCAGGGCATCACCAAGCCGGCTAT 1369
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| || |||||||| ||||| || || ||||| |||| || | |||| || ||||
Sbjct 1368 CCGCCGCCTGGCTCGGCGTGGCGGTGTGAAGCGCATCTCGGGGCTCATCTACGAGGAGAC 1309
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | || ||||| ||||| | ||| ||| || | ||||||| || ||| || ||
Sbjct 1308 GCGCGGCGTGTTGAAAGTCTTCTTGGAGAACGTGATTCGTGATGCTGTCACCTACACGGA 1249
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || | ||||| || ||| | ||||| | ||||| || |||| || || ||
Sbjct 1248 GCACGCCAAGAGGAAGACGGTGACCGCTATGGACGTGGTCTACGCTCTGAAGCGGCAGGG 1189
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
|| | | || ||||| || |||||
Sbjct 1188 ACGCACCCTCTACGGTTTCGGCGGTTAA 1161
>seq180045
Length=8581
Score = 100 bits (110), Expect = 4e-17
Identities = 121/165 (73%), Gaps = 0/165 (0%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| ||||| || |||| | || || || || ||||| || ||||||||||| || ||
Sbjct 4195 CGCCAAGCGCCACCGCAAAGTGCTGCGCGACAATATCCAGGGCATCACCAAGCCGGCCAT 4254
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| || |||||||| ||||| || || ||||| |||| || | |||| || ||||
Sbjct 4255 CCGCCGCCTGGCTCGGCGTGGCGGTGTGAAGCGCATCTCGGGGCTCATCTACGAGGAGAC 4314
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGC 16596
|| | ||| ||||| |||| || ||| ||| |||| |||||
Sbjct 4315 GCGCGGTGTGTTGAAAGTCTTTCTAGAGAACGTGATCCGCGATGC 4359
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 78898930753470
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |