Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ara_20macao_20[genbank_20GCA_5F000400695.1_202013-06-26] 192,790 sequences; 1,204,700,227 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq64820 104 2e-17 >seq64820 Length=6338 Score = 104 bits (114), Expect = 2e-17 Identities = 110/144 (76%), Gaps = 1/144 (1%) Strand=Plus/Minus Query 21490 ATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCC 21549 || || |||| |||| ||||| || | |||||||||||| || | || ||||||||||| Sbjct 3461 ATTCATACCT-CATCTCTACTGATGAGTTCATTAGAAAAGGTGAGTCCAGGCATTAATCC 3403 Query 21550 TCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCTCAACGGC 21609 ||| ||||| | |||||| ||||| ||||| | || || ||||| || || || || || Sbjct 3402 TCTTTTTTTCAGCCAAAAAATTGATGCAAAAGAGCCAGAGAAGAAGATTCCTTCCACTGC 3343 Query 21610 AGCAAATGCAACTAATCGTTCACC 21633 || || || |||| ||||| || Sbjct 3342 TGCGAAAGCTACTACACGTTCCCC 3319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530618985559600