Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ara_20macao_20[genbank_20GCA_5F000400695.1_202013-06-26] 192,790 sequences; 1,204,700,227 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq159201 95.1 3e-14 seq22601 89.7 1e-12 >seq159201 Length=4296 Score = 95.1 bits (104), Expect = 3e-14 Identities = 123/168 (73%), Gaps = 4/168 (2%) Strand=Plus/Minus Query 111389 TACAAATGCAAATGAACTTGCAGCAAAAAATGTAAAAATTTGGGATGGAAATGGATCACG 111448 ||||||||| || || || | |||||| ||| || |||||||||| ||||| ||||| Sbjct 2494 TACAAATGCCAAAGAGCTCTCTGCAAAAGGTGTGAAGATTTGGGATGCTAATGGGTCACG 2435 Query 111449 TGACTTTCTAGATT--CAGTTGGTCTTGTCGACAACGAAGAAGGTGATCTCGGACCAGTT 111506 ||| || || ||| ||| ||| | | || || || || ||| | ||||||||| Sbjct 2434 TGAGTTCCTGGATAAGCAG--GGTTTCAGCACCAGAGAGGAGGGGGATTTGGGACCAGTT 2377 Query 111507 TACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAACCATGCAC 111554 || || || || ||| | |||||||| ||||| |||||| |||||| Sbjct 2376 TATGGTTTCCAGTGGAGGCACTTTGGAGCAGAATACAAAGATATGCAC 2329 >seq22601 Length=11492 Score = 89.7 bits (98), Expect = 1e-12 Identities = 132/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 364952 AGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTT 365011 ||||||| || | |||| || |||||||||| | ||||| ||||| ||||| || | Sbjct 5230 AGAACATCCCTGAGATTCCGGATGATCTGAAGCAGCTCTACAAGACCGTGTGGGAGATCT 5289 Query 365012 CCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGT 365071 || | |||| || | | ||||| || || | || ||||| ||| ||||||||||| Sbjct 5290 CCCAGAAAACTGTCCTCAAGATGGCAGCAGACAGAGGAGCTTTCATCGATCAGAGCCAGT 5349 Query 365072 CGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACG 365131 | | ||| | ||| | |||| | || || |||||| || |||||| ||||| | Sbjct 5350 CCCTCAACATCCACATTGCAGAGCCCAACTACGGCAAGCTCACCAGCATGCACTTCTATG 5409 Query 365132 GGTGGAA 365138 | ||||| Sbjct 5410 GCTGGAA 5416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1300134157761780