Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ara_20macao_20[genbank_20GCA_5F000400695.1_202013-06-26] 192,790 sequences; 1,204,700,227 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq145348 95.1 2e-14 seq184904 86.0 1e-11 seq18576 84.2 4e-11 >seq145348 Length=1016 Score = 95.1 bits (104), Expect = 2e-14 Identities = 65/72 (90%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 142053 GTCTCTGTGGCGCAATGGAC-AGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAC 142111 |||||||||||||||||||| |||||| ||||||||||||||| ||||| ||||||||| Sbjct 858 GTCTCTGTGGCGCAATGGACGAGCGCGCTGGACTTCTAATCCAGAGGTTCCGGGTTCGAG 917 Query 142112 CCCCGCCAGAGA 142123 |||| |||||| Sbjct 918 TCCCGGCAGAGA 929 >seq184904 Length=1544 Score = 86.0 bits (94), Expect = 1e-11 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 142506 CCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCC 142565 |||| |||||||||||||||||| ||||||||||||| |||||||||||||||||| Sbjct 1 CCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGCCC 60 Query 142566 CACATCGGGC 142575 ||| | |||| Sbjct 61 CACGTTGGGC 70 >seq18576 Length=648 Score = 84.2 bits (92), Expect = 4e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561 |||||||| |||||||||| ||||||| ||||||||||||| ||||||||||||| Sbjct 571 TAGCCCGGCTAGCTCAGTCAGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGT 630 Query 142562 GCCCCACATCGGGC 142575 ||||||| | |||| Sbjct 631 GCCCCACGTTGGGC 644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1025297917836390