Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ara_20macao_20[genbank_20GCA_5F000400695.1_202013-06-26] 192,790 sequences; 1,204,700,227 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq156087 93.3 4e-14 seq159201 87.8 2e-12 >seq156087 Length=3981 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 20237 AGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGA 20296 || || || ||||| |||| ||||||||| | | |||||||||||||| || ||||| Sbjct 3264 AGCCCCGTGACATGGGCAATCATATAAGTAAGCAATGAATAGCTGGCAATATTGAAAGGC 3323 Query 20297 ACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCT 20356 ||||| | ||||| ||||| ||||||||||| || || || || | ||||| || Sbjct 3324 ACTCCTAGTCCCATATCTCCAGACCTCTGATAGAGTTGGCATGACAATTCACCATCGAGA 3383 Query 20357 ACATAAAATTGACA 20370 ||||| || || || Sbjct 3384 ACATAGAACTGGCA 3397 >seq159201 Length=4296 Score = 87.8 bits (96), Expect = 2e-12 Identities = 102/135 (76%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 20534 GCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCT-GTG 20592 || ||||||||||||||||||||||| ||||| |||||||||||||||||| ||| ||| Sbjct 2348 GCTCCAAAGTGCCTCCACTGGAAACCATAAACTGGTCCCAAATCCCCCTCCTCTCTGGTG 2407 Query 20593 CGCCAGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGACTCC 20652 | | || || |||||||||| | || ||||| ||||| ||||| || || Sbjct 2408 C-TGAAACCCTGCTTATCCAGGAACTCACGTGACCCATTAGCATCCCAAATCTTCACACC 2466 Query 20653 TGTTCTTGAAAGCTC 20667 | || || ||||| Sbjct 2467 TTTTGCAGAGAGCTC 2481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440309146723600