Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ara_20macao_20[genbank_20GCA_5F000400695.1_202013-06-26] 192,790 sequences; 1,204,700,227 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq156245 91.5 1e-13 seq11258 84.2 2e-11 >seq156245 Length=697 Score = 91.5 bits (100), Expect = 1e-13 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 153642 TACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTG 153701 |||| |||||| || | || |||||||||||||| ||| ||||| || ||||| ||| Sbjct 363 TACTCCACGATTTCTGTACACAGGTTGCTGCATTTGATGGTGCCCAGGTTCTGCTGGTTG 304 Query 153702 CTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTC 153751 || || | ||||| | ||||||| |||||||||| ||| ||| ||||| Sbjct 303 CTCTTCCTGTTGCAGGAGTCTTTGTAGAGCATGTAGGGTGTGCCTGTCTC 254 >seq11258 Length=1071 Score = 84.2 bits (92), Expect = 2e-11 Identities = 159/233 (68%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 138385 CAGCCGCCTCGCAAA--CGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGT 138442 ||| ||| | |||| |||| || | ||| | | | || ||||| || |||||||||| Sbjct 266 CAGGCGCAGCACAAAGGCGCAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGT 207 Query 138443 CGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCG 138502 || || || ||| ||||| || || || || | |||| | | ||| ||||| | Sbjct 206 CGGACAGGGTGCGCCCATCCTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCAG 147 Query 138503 GAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACT 138562 | || || || || ||||| ||| || || | | || | ||||||| | | || Sbjct 146 GGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTGGGCT 87 Query 138563 CCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||||||| | || | || || |||||||| || || ||||| ||||||||| Sbjct 86 CCACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 34 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495066469648800