Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ara_20macao_20[genbank_20GCA_5F000400695.1_202013-06-26] 192,790 sequences; 1,204,700,227 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq11258 120 7e-22 seq33063 98.7 2e-15 seq37018 89.7 1e-12 >seq11258 Length=1071 Score = 120 bits (132), Expect = 7e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 199411 AAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCT 199470 ||| | ||| ||||| ||||| || || ||||| |||| ||||||||| | || || | Sbjct 253 AAGGCGCAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCG 194 Query 199471 TCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTC 199530 ||||| ||||||||||| || |||||||| | | ||||||||| || ||| || || Sbjct 193 CCCATCCTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGAATGCCCTC 134 Query 199531 TCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGT 199590 ||||| ||||| |||||| || | |||||| | | || || |||| || Sbjct 133 CTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGT 74 Query 199591 GATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| ||||| || || || || |||||||| || || Sbjct 73 GATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTG 38 >seq33063 Length=22908 Score = 98.7 bits (108), Expect = 2e-15 Identities = 83/102 (81%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||| ||||| ||||| || || ||||| |||| ||||||||||| || || | ||| || Sbjct 39 CAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCGTC 98 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 |||||||||||| || |||||||| || | ||||||||| || Sbjct 99 TTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGG 140 >seq37018 Length=4169 Score = 89.7 bits (98), Expect = 1e-12 Identities = 72/87 (83%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 199442 TTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATG 199501 ||||||| ||||||||||| || || | ||||||||| ||||||||||| || ||||| Sbjct 729 TTTTGGATGTTGTAGTCAGACAGCGTGCGTCCATCTTCGAGCTGCTTTCCAGCAAAGATC 670 Query 199502 AGACGCTGCTGGTCCGGAAAAATTCCT 199528 || ||||||||||| ||| ||| ||| Sbjct 669 AGTCGCTGCTGGTCAGGAGGAATGCCT 643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1176009519966930