Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ara_20macao_20[genbank_20GCA_5F000400695.1_202013-06-26] 192,790 sequences; 1,204,700,227 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq11258 140 3e-28 seq33063 93.3 4e-14 seq20857 86.0 6e-12 seq148742 84.2 2e-11 seq17506 82.4 8e-11 >seq11258 Length=1071 Score = 140 bits (154), Expect = 3e-28 Identities = 160/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || ||||| ||||||||| | || || ||| ||| | Sbjct 35 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTGGAGGTGGAGCCCAGC 94 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || |||| ||||| ||||| |||||| | ||||| Sbjct 95 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAG 154 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| || | || | ||| ||||| |||||||| || | ||||||||| |||||||||| Sbjct 155 CAGAGGTTGATCTTCGCTGGCAAGCAGCTGGAGGATGGGCGCACCCTGTCCGACTACAAC 214 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||| |||||| | || || ||| | |||||||| Sbjct 215 ATCCAGAAGGAATCCACCCTCCATCTTGTGCTGCG 249 >seq33063 Length=22908 Score = 93.3 bits (102), Expect = 4e-14 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 38358 GACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGAC 38417 ||||| ||| |||| || | ||| ||||| |||||||| |||| |||||||| ||| Sbjct 137 GACCAGCAGAGGCTGATCTTCGCTGGCAAGCAGCTGGAAGACGGACGCACCCTGTCTGAC 78 Query 38418 TACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||||||||| |||||| | || || ||| | |||||||| | ||||| ||| Sbjct 77 TACAACATCCAGAAGGAATCCACCCTCCATCTTGTGCTGCGCCTCAGAGGTGGC 24 >seq20857 Length=58616 Score = 86.0 bits (94), Expect = 6e-12 Identities = 73/89 (82%), Gaps = 1/89 (1%) Strand=Plus/Minus Query 38346 GGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGC 38405 || || ||| | ||||| ||||| ||||| | ||||||||| |||||||| |||| || Sbjct 491 GGGATCCCCCCGGACCAGCAGCGCCTCATCTTCGCGGGCAAGCAGCTGGAGGACGGCCGG 432 Query 38406 ACCCTCAACGACTACAACATCCA-AAAGG 38433 |||||| ||||||||||||||| ||||| Sbjct 431 ACCCTCGCCGACTACAACATCCAGAAAGG 403 >seq148742 Length=4363 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 132917 CCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTT 132976 |||| || ||| ||| ||||| ||| |||||||| || ||||| ||||| | || | Sbjct 501 CCTCATCTCTGCTAATAAGTTCATTGGAGAAAGTCAGCCCTGGCATCAGGCCCCTCTTCT 442 Query 132977 TGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAG 133036 | ||||||||||| || || || ||||||||||||| ||| || || || || || | Sbjct 441 TCAGCCAAAATATAGCAGCAAAGGAACCCGAAAAGAAGATGCCTTCAACTGCAGCAAAGG 382 Query 133037 CCACCA 133042 | |||| Sbjct 381 CAACCA 376 >seq17506 Length=29135 Score = 82.4 bits (90), Expect = 8e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 133395 CACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACATACTCCACATGTCCGA 133454 |||||| || | |||||||| || |||| || | ||||||||| |||| ||||| | Sbjct 5530 CACCTCTTCTGCAGTCCAAAAGGAGGCCTGAGCCTGTTTGTACATTTTCCATATGTCTGG 5589 Query 133455 ATATTGTATGGGAAAAATCACAAACCGGCGGGGGTTTT 133492 || || ||||| || || ||||||||||||||||||| Sbjct 5590 GTACTGGATGGGGAAGATGACAAACCGGCGGGGGTTTT 5627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 498967446073600