Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ara_20macao_20[genbank_20GCA_5F000400695.1_202013-06-26] 192,790 sequences; 1,204,700,227 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq137757 105 5e-17 seq22621 96.9 3e-14 >seq137757 Length=27055 Score = 105 bits (116), Expect = 5e-17 Identities = 99/126 (79%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 366993 TGTAGTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTAT 367052 ||| ||||| ||| | |||||||| ||||| || |||||| | ||| | | | ||||| Sbjct 12304 TGTTGTAGCTACAGTGGCATTTGGAATGGGCATCAATAAAGCAGATATCCGGATGGTTAT 12363 Query 367053 TCATTATGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCG 367112 ||||||||| || || ||| | || ||| ||||| ||||||||||| ||||| ||||| Sbjct 12364 TCATTATGGTGCCCCTAAGGAAATGGAATCCTATTACCAAGAAATTGGGAGAGCTGGTCG 12423 Query 367113 TGATGG 367118 |||||| Sbjct 12424 TGATGG 12429 >seq22621 Length=30986 Score = 96.9 bits (106), Expect = 3e-14 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 518453 AATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAAT 518512 || ||||||| |||||||| || || || | |||||| | | | | || || | Sbjct 3911 AAGGGCCAGTGCTTCATATCGGACTGCACCGTAGGGTCATCATACTTGCGGCCGATGAGA 3852 Query 518513 CGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCT 518572 || || |||||||| || || ||||| || || || || | || | ||||||||||| Sbjct 3851 CGCTTAGCATCAAAGATGGTGTTGGTAGGGTTCATAGCCACCTGGTTCTTGGCTGCATCA 3792 Query 518573 CCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGA 518632 || || || | ||||| || || || | ||||| || || ||||| || ||||| Sbjct 3791 CCGATGAGGCGCTCTGTATCAGTGAAGGCCACATAGCTGGGTGTGGTGCGGTTCCCTTGG 3732 Query 518633 TCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAA 518680 || || ||||| || || ||||| |||| || | ||||| || ||| Sbjct 3731 TCGTTGGCAATGATCTCCACTTTGCCATGCTGGAAGACACCCACGCAA 3684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3771255525149740