Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ara_20macao_20[genbank_20GCA_5F000400695.1_202013-06-26] 192,790 sequences; 1,204,700,227 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq156245 93.3 5e-14 seq148742 86.0 7e-12 seq64820 86.0 7e-12 >seq156245 Length=697 Score = 93.3 bits (102), Expect = 5e-14 Identities = 95/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 106505 GTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGG 106564 || ||||| | ||||||||||||| |||| | || || || |||| |||| ||| Sbjct 366 GTATACTCCACGATTTCTGTACACAGGTTGCTGCATTTGATGGTGCCCAGGTTCTGCTGG 307 Query 106565 TTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGT 106624 || ||||| ||||||| | || ||||||||||||||||| || || ||||| ||||| Sbjct 306 TTGCTCTTCCTGTTGCAGGAGTCTTTGTAGAGCATGTAGGGTGTGCCTGTCTCAGTCTGC 247 Query 106625 GACT 106628 |||| Sbjct 246 GACT 243 >seq148742 Length=4363 Score = 86.0 bits (94), Expect = 7e-12 Identities = 95/124 (77%), Gaps = 2/124 (2%) Strand=Plus/Minus Query 117293 CCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCGCTTCT 117352 ||||||||| | |||||||||||| ||||| || |||||||| || |||| ||||| Sbjct 501 CCTCATCTCTGCTAATAAGTTCATTGGAGAAAGTCAGCCCTGGCATCAGGCCCCTCTTCT 442 Query 117353 TCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 117411 ||| |||| | ||||| ||| || || || || |||||||| || || || ||||| Sbjct 441 TCAGCCAAAATATAGCAGCA-AAGGAACCCGAAAAGAAGATGCCTTCAACTGCAGCAAAG 383 Query 117412 GCAA 117415 |||| Sbjct 382 GCAA 379 >seq64820 Length=6338 Score = 86.0 bits (94), Expect = 7e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 116985 ATAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCAT 117044 ||| || || |||||||||||||||||||||||||| || || || ||||||||||| Sbjct 4688 ATATTCACCTACTCGCTTCTCAAAGAAGTTGGTCTTGCCCTCCAGAGAGATGTTTTCCAT 4629 Query 117045 AAAGTCAAATGGATTCT 117061 |||||||| ||||||| Sbjct 4628 GAAGTCAAAAGGATTCT 4612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588559020019600