Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ara_20macao_20[genbank_20GCA_5F000400695.1_202013-06-26] 192,790 sequences; 1,204,700,227 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq30197 120 2e-21 seq22621 104 2e-16 >seq30197 Length=39373 Score = 120 bits (132), Expect = 2e-21 Identities = 110/139 (79%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457 |||| ||| | ||||| ||||| ||||| || || || || ||||| ||||| ||||||| Sbjct 24768 ATGCTGTAGTGACTGTCCCAGCCTATTTCAACGATTCTCAGCGTCAGGCTACGAAAGATG 24827 Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517 ||||| ||||| || || ||||| || || ||||||||||| || || ||||||||| Sbjct 24828 CTGGAACCATTGCAGGGCTCAATGTCCTGCGAATTATCAATGAGCCGACAGCTGCTGCAA 24887 Query 550518 TTGCATATGGACTTGATAA 550536 | || ||||| || ||||| Sbjct 24888 TAGCCTATGGTCTGGATAA 24906 >seq22621 Length=30986 Score = 104 bits (114), Expect = 2e-16 Identities = 180/262 (69%), Gaps = 0/262 (0%) Strand=Plus/Plus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 || || || || || | || ||||| || ||| || ||||| | || |||| ||| Sbjct 3652 GCAATCGGCATCGACCTGGGCACCACGTACTCTTGCGTGGGTGTCTTCCAGCATGGCAAA 3711 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 || || || |||||||| || ||||| ||| | || || || ||||| | ||||| Sbjct 3712 GTGGAGATCATTGCCAACGACCAAGGGAACCGCACCACACCCAGCTATGTGGCCTTCACT 3771 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 || || || | | | ||||||||||| || | || | || || |||||||| Sbjct 3772 GATACAGAGCGCCTCATCGGTGATGCAGCCAAGAACCAGGTGGCTATGAACCCTACCAAC 3831 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231 || || ||||||||||| ||| | || || | | | | |||| | || || ||| | Sbjct 3832 ACCATCTTTGATGCTAAGCGTCTCATCGGCCGCAAGTATGATGACCCTACGGTGCAGTCC 3891 Query 550232 GATATGAAGCATTGGCCTTTCC 550253 ||||||||||| ||||| |||| Sbjct 3892 GATATGAAGCACTGGCCCTTCC 3913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4019100395317100