Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ara_20macao_20[genbank_20GCA_5F000400695.1_202013-06-26] 192,790 sequences; 1,204,700,227 total letters Query= NC_020474.2 Length=180421 Score E Sequences producing significant alignments: (Bits) Value seq5349 136 5e-27 seq75926 123 3e-23 >seq5349 Length=25177 Score = 136 bits (150), Expect = 5e-27 Identities = 238/346 (69%), Gaps = 3/346 (1%) Strand=Plus/Minus Query 160044 CTGTGTCGCAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAAT 160103 ||||| ||||| || || ||||||||||||| ||| |||| || |||||| Sbjct 378 CTGTGGCGCAGGTGCTCCTCCAGACATTGGATAGCGGCGTCGTCCACCAAGGGGTCGAAC 319 Query 160104 TTATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAAC 160163 || || || || || ||||| | ||| || |||||| ||||||| || |||| | Sbjct 318 TTGTTGGCCAAGAGGTGGTG---CTGCTGGAGCATCCAGGGCACGTCGCCCACCCCGTAG 262 Query 160164 ACGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACG 160223 | |||||||| || |||| |||| |||| |||||||| | || || || | Sbjct 261 ATGCAGACGGCGCGCTGGTGCTGGCCGGTGCAGGGCGGGTAGGGCGCGCCCTTGTTGGTG 202 Query 160224 TCACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCG 160283 || || || ||||| |||||| || | | || | | | |||||| ||| | | Sbjct 201 TCCCCCTCCAGGTACTCCCACTTGACCAGACGGGGCAGGGAGTTCATGTCTGAGAGCTGG 142 Query 160284 TATTTGTACATCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCAC 160343 | |||| || |||| | ||| ||||| || || |||| ||| | || |||||||| Sbjct 141 AACTTGTCGTTCGGGGGCATGGCGCCGGGCACACCAGGCACACGGTTGAGCGTGGCCCAG 82 Query 160344 AGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACT 160389 | ||| ||||| |||||||| |||||||| | ||| || | ||||| Sbjct 81 ACGTGCTCGTCAGGGCTGTAGGTGTCCTTGGCCCACTCGAGGAACT 36 >seq75926 Length=1118 Score = 123 bits (136), Expect = 3e-23 Identities = 225/327 (69%), Gaps = 2/327 (1%) Strand=Plus/Plus Query 160566 GGCATGCGTTCCGTCTCTAGACTGTTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATC 160625 ||||| ||| || || | ||||| ||||| | || | ||| | | || || || Sbjct 88 GGCATTTTTTCTGTTTCCAAGCTGTTTGCACCTTTAAGGGCTTTTAATTTCTCTACTATT 147 Query 160626 TCTAGGTTCGTCTTGAGCGGAAAGTCGGTACCGCACAAGTTTATCACGTACTTCCATTTC 160685 || |||| ||||| | |||||||| | || || | |||||| | ||| ||||| || Sbjct 148 TCCTGGTTGGTCTTTATTGGAAAGTCCATGCCACAGAGGTTTATTAGGTATTTCCAGTTT 207 Query 160686 GCGCTCAGGTCGTGCAGGTCCCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAA 160745 | || || ||||| ||||||| ||||| ||||||||||| | |||||| ||| Sbjct 208 GAACTTCTTCTGTAGAGGTCTTTCATGCAGTTAATGTCTGCCTGCACTCTGCTCCATGAA 267 Query 160746 GCGTACACTACGTTCTCTAGTTTACTGGCCACAAAGACGTTATCGAAACACGACACGATT 160805 || ||||| || |||||| | ||| | | |||||| ||||| ||||| || || || Sbjct 268 GCATACACAACACTCTCTAACTGACTAGAAATAAAGACATTATCAAAACATGAGACTATG 327 Query 160806 CCCACCACCGCCAGAAAGAACATCTTAT-CCGCCTTTCGGTCCACGTGCACGCAATACAG 160864 ||| ||| | ||| || || | || | | |||| ||| || || | ||| || | Sbjct 328 CCCCTCACAG-CAGCAAAAAAAGATTCTGGAGACTTTTTGTCAACATGAATGCAGTAAAA 386 Query 160865 GTTCTGAGGCGCGTAGATGGCCCTGAG 160891 |||||||| || ||||| | ||| || Sbjct 387 ATTCTGAGGGGCATAGATTGACCTTAG 413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 575828173880400