Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ara_20macao_20[genbank_20GCA_5F000400695.1_202013-06-26] 192,790 sequences; 1,204,700,227 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq148742 86.0 7e-12 seq64820 86.0 7e-12 >seq148742 Length=4363 Score = 86.0 bits (94), Expect = 7e-12 Identities = 95/124 (77%), Gaps = 2/124 (2%) Strand=Plus/Plus Query 65087 TTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGC-GCTATTTATTGG 65145 |||| ||||| || || || |||||||| || || || || ||| ||||| | |||| Sbjct 379 TTGCCTTTGCTGCAGTTGAAGGCATCTTCTTTTCGGGTTCCTT-TGCTGCTATATTTTGG 437 Query 65146 TTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGAT 65205 |||||||| |||| || |||||||| || ||||| |||||||||||| | ||||| Sbjct 438 CTGAAGAAGAGGGGCCTGATGCCAGGGCTGACTTTCTCCAATGAACTTATTAGCAGAGAT 497 Query 65206 GAGG 65209 |||| Sbjct 498 GAGG 501 >seq64820 Length=6338 Score = 86.0 bits (94), Expect = 7e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 65441 AGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACTTCTTTGAGA 65500 ||||||| |||||||| ||||||||||| || || || ||||||||||||||||||| Sbjct 4612 AGAATCCTTTTGACTTCATGGAAAACATCTCTCTGGAGGGCAAGACCAACTTCTTTGAGA 4671 Query 65501 AGCGAGTTGGGGACTAT 65517 ||||||| || || ||| Sbjct 4672 AGCGAGTAGGTGAATAT 4688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595131941835200